Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01373 CCCACTTCTTCCTGGATTCAGGTAATCCTCATAATTCACAGCAAAAATGGAGCTTTCGAAGCCCTCACATCCTGCTCAGCATGTTGCCACCGGAGATACCTTTTATGGGTTCTCTCTACAGTCGAGCTTACCTTTAGGCTTTAACGGGTTAGCGACTTCCCATGCGCTCGAAGCTATGGAAGAATGTGATGAAAAAGTGCATGTAGCGGTTGGGAAAACGGCTCAGAAAGCTGTAAACTTGCTTCAATGGGCTTTCACCAACTTTAGAAACAGAGAAATTCGTATACTTCATGTTTATCAACCTTCTTCTATGATCCCCACACTATTAGGAAAATTGCCAGCTACCCAAGCAAATCCTGAAGTAGTGTCTGCTTTTAGAAGAGAGGAAAGAGAACAGACCATGAAGCTTTTGGAATATTACGTGAGCATTTGTCTTGCAGCTAAGGTTAAGGCCAGTATTATGATAGCTGAAGCTGACCAAGTCCACAAAGGGATTGTTGATTTGGTGATCAGGCATGGTATTAGGAAGCTTGTTATGGGAGCTGCACCAGAAAATCGTATAAAGGTGAAAAGGAATTCTGGGAAAGCAAAATACACTACCAAGAATGCTCCCCCATTCTGTGAAATATGGTTTATCTACAAAGGAAAACACATGTGGACCCGAGAAGCTTCTGAGACACCATGTTCTTTGCCTTCATGTGCTCAACCCGTAATTCCAGCTGCAGGAAGCTTGAGATCTAGGTCATTTCAATATTCTAGGAGTGAATTATTCAACTCAGAGAGGCTCCAATCAAATTCTACAAGAACTGAAATCTGTACTGGAATTGGTAGTTGGGTTCATGGTGGAAAAGTTGAGACAGAAACAGCTTTTTCAACCTCAACATTTAGCTGTAATTCTTGCCCCGCGATTTCTGCTGAGAGAGATGAGTATTTAGATTCTCAGTCAGATGTTGAGGAAGAAAGACTTAATGGACAACTTATTGAAGCCAAAATAGAAGCTGAGGCAGCACGGGACAAGGCAATTACAGAGATAATAAAATGCAGAAGGTTGGAAACGGAAGCATTGGAGGCCATTAGAAAGGTCAATTTGTTTGAATCTGCCCATGCTTGTGAAGTAAAGCTCAGAAAGGAGACAGAAGGTGCTGTGCAAGCTGTAATACAGGAACAACAAAAGCTCTTGGTTGAGAATGAAGAAGTTGCCAGTGAGCTACAGAGGACCATGAGGAATGTTGCTCTTCTAGATAGTCGTGCACAGGAAGCAAACCGTAGGCGAGATGAAGCTGCAGATGAATTATCATTAATTCAACCTTCCATCTCTGCTCTGTGGCATGAAAAGCAGCTGATCAGGCAACAGAAAATGGTGGCCCTCGGTTGGCTTGAGCAGTGGAAAAGTCGTGGACAACTTGGAGCTGCACACTACAACGGGATCATTGGGTTTGCTGAAGGATTGCCTCAGTTGGCAGAATTTTCCTTGTTAGATCTTCAAAATGCCACGTGCAATTTTTCTGAGAGTTTCAAAATCATGCAGGGAGGATATGGTTCTATTTATAAGGGGGAAATGTTAGGTAAAACTGTCGCTATAAGAAAACTCCATATACATAACATGCGAGAACCAGCAGAGTTTCATCAAGAGGTTCAAGTCCTAGGTAGTCTCCGGCATCCCCATCTTGTGACGTTACTTGGTGTTTGCCCTGAAGCCTGGTCGCTTGTATACGATTACTTTCCCAATGGGAGTCTTCAAGACTACCTGTTCCAGAAAAGCAACATTTCCCCTTTGACATGGAATAACCGAGTGCGGATGATTGCTGAAATTGCTAGTGCTATCTGCTTCTTACACTCTTCCAAACCTGAGAGTATTGTCCACGGTGATCTGAAGCCTGAAAATATACTTTTTGATTCTGCGCTTGGATGCAAGATAAGTGAATTTGGGATCTGTAGGCTTGTGAGACAGGATTCACTCTATTGTCCTAGTTTCCGCTTGAGCACCGAGCCAAAGGGTTCTTTTACATATACAGATCCAGAGTTTCAGAGAAGTGGAATACTGACACCCAAGTCTGACGTCTACTCCTTTGGGCTCATCATTTTGCAACTACTCACTGGTAGGACTCCAGTTGGATTGGCAATTGAAGTACGTAAAGCTGTTTCTTGTGGAAAACTATCTTCGATTTTGGATTGTTCATCTGGAGAATGGCCTTCATCTGTGGTTACAAGATTGGTTGAACTGGGACTGCAATGCTGTCAACAAAATGGTAGAGACAGACCAAAGCTAACGCCTAGTTTGGTGAGGGAATTGAAGCAATTGCATGTTTCAGAAGACCCAGCAGTACCAAATTTCTTCTTGTGCCCCATCCTTCAGGAAATCATGCATGATCCTCAGGTTGCAGCCGATGGATTCACCTACGAAGGAGAAGCCATACAGGAATGGTTGGAAAGTGGGCATGAAACTTCTCCCATGACTAATTTAAAATTGAGTCTCCTTCATCTTACTCCAAACCATTCCTTACGACTCGCCATTCATGACTGGCTCTGTGAATCCTAA 2539 0.4325 MELSKPSHPAQHVATGDTFYGFSLQSSLPLGFNGLATSHALEAMEECDEKVHVAVGKTAQKAVNLLQWAFTNFRNREIRILHVYQPSSMIPTLLGKLPATQANPEVVSAFRREEREQTMKLLEYYVSICLAAKVKASIMIAEADQVHKGIVDLVIRHGIRKLVMGAAPENRIKVKRNSGKAKYTTKNAPPFCEIWFIYKGKHMWTREASETPCSLPSCAQPVIPAAGSLRSRSFQYSRSELFNSERLQSNSTRTEICTGIGSWVHGGKVETETAFSTSTFSCNSCPAISAERDEYLDSQSDVEEERLNGQLIEAKIEAEAARDKAITEIIKCRRLETEALEAIRKVNLFESAHACEVKLRKETEGAVQAVIQEQQKLLVENEEVASELQRTMRNVALLDSRAQEANRRRDEAADELSLIQPSISALWHEKQLIRQQKMVALGWLEQWKSRGQLGAAHYNGIIGFAEGLPQLAEFSLLDLQNATCNFSESFKIMQGGYGSIYKGEMLGKTVAIRKLHIHNMREPAEFHQEVQVLGSLRHPHLVTLLGVCPEAWSLVYDYFPNGSLQDYLFQKSNISPLTWNNRVRMIAEIASAICFLHSSKPESIVHGDLKPENILFDSALGCKISEFGICRLVRQDSLYCPSFRLSTEPKGSFTYTDPEFQRSGILTPKSDVYSFGLIILQLLTGRTPVGLAIEVRKAVSCGKLSSILDCSSGEWPSSVVTRLVELGLQCCQQNGRDRPKLTPSLVRELKQLHVSEDPAVPNFFLCPILQEIMHDPQVAADGFTYEGEAIQEWLESGHETSPMTNLKLSLLHLTPNHSLRLAIHDWLCES 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01373 830 Gene3D Phosphorylase Kinase; domain 1 464 558 - -
Bach13g01373 830 ProSiteProfiles Protein kinase domain profile. 486 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g01373 830 Gene3D HUPs 42 173 IPR014729 -
Bach13g01373 830 Coils Coil 304 324 - -
Bach13g01373 830 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 760 830 IPR013083 -
Bach13g01373 830 CDD RING-Ubox_WDSUB1-like 761 816 - -
Bach13g01373 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 604 616 IPR008271 GO:0004672|GO:0006468
Bach13g01373 830 SUPERFAMILY Protein kinase-like (PK-like) 470 743 IPR011009 -
Bach13g01373 830 Pfam U-box domain 760 829 IPR003613 GO:0004842|GO:0016567
Bach13g01373 830 Pfam Protein tyrosine and serine/threonine kinase 491 742 IPR001245 GO:0004672|GO:0006468
Bach13g01373 830 Gene3D Transferase(Phosphotransferase) domain 1 559 759 - -
Bach13g01373 830 SUPERFAMILY RING/U-box 759 829 - -
Bach13g01373 830 CDD STK_N 50 200 - -
Bach13g01373 830 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 62 171 - -
Bach13g01373 830 Coils Coil 371 415 - -
Bach13g01373 830 SMART serkin_6 490 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g01373 830 ProSiteProfiles U-box domain profile. 759 830 IPR003613 GO:0004842|GO:0016567
Bach13g01373 830 PANTHER OS02G0152300 PROTEIN 51 824 - -
Bach13g01373 830 SMART Ubox_2 763 826 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01373 Bach-Chr13 17818297 17823249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01373 48 827 U-box Gene Family AT2G45910 38.148 9.82e-175 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Bach13g01373 PK_Tyr_Ser-Thr 1.9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01373 - - pcin:129312791 1168.68