Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01358 ATGGCTCAAAGAGTTGGCACAAGGCTCTTCATTAGCAGGTTATCATTTTACACTACAAAGGATCATCTAAAGAAGTTATTTTCTCCTTTTGGAGATGTTACAGAAGCTTCTTTGGTGATGGACCAAAAAACTCAAAGGCCCAAAGGGTTTGGCTATGTCTCATACAAGACTGAAATTGAAGCCAAGAAGGCCATGAAAGCCATGAATGGCAGGATAATTAACGGGAGGCTGATTTTCGTTGAACCCGCAACAATCAAATGA 261 0.4061 MAQRVGTRLFISRLSFYTTKDHLKKLFSPFGDVTEASLVMDQKTQRPKGFGYVSYKTEIEAKKAMKAMNGRIINGRLIFVEPATIK 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01358 86 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 8 83 - -
Bach13g01358 86 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 78 IPR000504 GO:0003723
Bach13g01358 86 Gene3D - 2 86 IPR012677 -
Bach13g01358 86 SMART rrm1_1 8 81 IPR000504 GO:0003723
Bach13g01358 86 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 2 86 - -
Bach13g01358 86 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 85 IPR000504 GO:0003723
Bach13g01358 86 SUPERFAMILY RNA-binding domain, RBD 6 83 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01358 Bach-Chr13 17708771 17710587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01358 1 86 C2H2 Transcription Factor Family AT2G19380 36.047 5.77e-12 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01358 - K13195 pcin:129306862 133.65