Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01352 ATGGTTCAACAGGAAATCAGAAAAGGTCCGTGGACAGAACAGGAGGACCTCAAATTGGTCAACTTTGTGGGCTTGTTTGGAGATCGGAGATGGGACTTTATAGCCAAAGTCTCAGGTTTGAAGGTGGTGGGAGAAGGTTTGAATAGAACAGGTAAGAGTTGCAGGTTACGGTGGGTTAATTACTTGCATCCTGGTCTCAAACGAGGGAAGATGACACCCCAAGAAGAGCGCCTTGTAATGGAACTTCACCAAAAATGGGGAAATAGATGGTCAAGAATTGCTCATAAATTACCAGGGCGCACAGACAATGAGATTAAGAATTATTGGAGAACACACATGAGGAAGAAGGCTCAGGAGAAAAAGAAAACAGCCAATCCATCATCAACATCATCTAGTTGTCTTTCTTCATTATCATCAGACAACCATACAGTAGATTCATATCCTTCCAAAAAGACTGGAGAAGAAAGTTTTTATGACACGGGAGGGGCAAATATGACAGCCTCCACAGGAGCGATGATAGGAGAAGAGCAACAAGGTGAACAAGGTTACTCCATGGATGATATATGGAAAGATATCGATCTCTCAGAAGAGAACATTCTACTACCAGTATATAAAGGGCACGGTGAAGAGAGCTGCAACATCTCTTGTCCTATCATGCCTTCTCCATCATGGGAATATTCTTCAGACATGATATGGGTGATGGATGAGGAAGAAAGTAAGAAGTTTCTCCCTATATCTGACCAATTCTTTTCCTCATATGAACAGGGAGAGCACTTCTAA 780 0.4231 MVQQEIRKGPWTEQEDLKLVNFVGLFGDRRWDFIAKVSGLKVVGEGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVMELHQKWGNRWSRIAHKLPGRTDNEIKNYWRTHMRKKAQEKKKTANPSSTSSSCLSSLSSDNHTVDSYPSKKTGEESFYDTGGANMTASTGAMIGEEQQGEQGYSMDDIWKDIDLSEENILLPVYKGHGEESCNISCPIMPSPSWEYSSDMIWVMDEEESKKFLPISDQFFSSYEQGEHF 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01352 259 MobiDBLite consensus disorder prediction 114 160 - -
Bach13g01352 259 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Bach13g01352 259 Pfam Myb-like DNA-binding domain 8 62 IPR001005 -
Bach13g01352 259 SMART sant 67 115 IPR001005 -
Bach13g01352 259 SMART sant 7 64 IPR001005 -
Bach13g01352 259 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 62 IPR017930 -
Bach13g01352 259 ProSiteProfiles Myb-like domain profile. 3 62 IPR001005 -
Bach13g01352 259 CDD SANT 10 62 IPR001005 -
Bach13g01352 259 FunFam MYB transcription factor 70 136 - -
Bach13g01352 259 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Bach13g01352 259 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 3 132 IPR044676 GO:0003700|GO:0006355|GO:0043565
Bach13g01352 259 Gene3D - 70 136 - -
Bach13g01352 259 MobiDBLite consensus disorder prediction 123 146 - -
Bach13g01352 259 FunFam Myb transcription factor 8 67 - -
Bach13g01352 259 CDD SANT 70 113 IPR001005 -
Bach13g01352 259 SUPERFAMILY Homeodomain-like 5 109 IPR009057 -
Bach13g01352 259 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Bach13g01352 259 Gene3D - 8 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01352 Bach-Chr13 17657938 17658919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01352 1 256 MYB Transcription Factor Family AT5G59780 59.922 5.15e-94 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach13g01352 Myb_DNA-binding 1.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01352 K09422 - qsa:O6P43_028279 395.201