Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01350 ATGGCGATTTCTAGAATTGCCATTGGACATGCATCAGAGTTCAGCCAAGGCGACGCTCTTAGGGCCGCACTTGCTGAGTTCATCTCAATGCTCATCTTTGTCTTTGCTGGCGAAGGCTCTGGCATGGCATTCAACAAGCTTACCGACAATGGTTCAACAACACCAGCAGGGTTAGTGGCAGCATCACTGGCTCATGCCTTCGCACTCTTTGTGGCTGTCTCTGTTGGTGCTAACATTTCTGGTGGACATGTGAACCCTGCTGTTACATTCGGTGCCTTCGTTGGTGGTCACATCACCCTCCTTAGGAGTGTTTTGTACTGGATTGCCCAGTTGCTCGGTTCTGTCGTTGCTTGCTTGCTCCTTAAATTCGCCACAGGTGGACTGGAAACGTCTGCATTCTCTCTGTCTTCTGGCGTGGGTGCATGGAACGCAGTTGTCTTTGAAATTGTGATGACTTTTGGTTTGGTTTATACTGTATATGCCACTGCCGTTGACCCAAAGAAGGGTAACATTGGAATCATTGCGCCCATTGCAATTGGTTTCATAGTGGGTGCTAACATCTTGGCTGGTGGTGCCTTTGATGGTGCATCAATGAACCCAGCAGTGTCTTTTGGACCCGCTGTTGTTAGCTGGACATGGGATAACCACTGGGTCTACTGGCTCGGCCCATTCGTTGGCGCTGCCATTGCTGCCGTTGTCTACGAGATTTTCTTCATCAGCCCAGACACCCATGAACAACTCCCAACCGCAGACTATTAG 759 0.4993 MAISRIAIGHASEFSQGDALRAALAEFISMLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSVLYWIAQLLGSVVACLLLKFATGGLETSAFSLSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFVGAAIAAVVYEIFFISPDTHEQLPTADY 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01350 252 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Bach13g01350 252 Pfam Major intrinsic protein 15 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach13g01350 252 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach13g01350 252 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach13g01350 252 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach13g01350 252 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach13g01350 252 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach13g01350 252 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach13g01350 252 SUPERFAMILY Aquaporin-like 18 242 IPR023271 -
Bach13g01350 252 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach13g01350 252 Gene3D Glycerol uptake facilitator protein. 4 252 IPR023271 -
Bach13g01350 252 PANTHER AQUAPORIN-8 6 247 IPR034294 -
Bach13g01350 252 FunFam Probable aquaporin TIP1-1 4 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01350 Bach-Chr13 17650710 17651704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01350 1 252 Major Intrinsic Protein MIP AT4G01470 78.968 1.05e-142 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01350 K09873 - tcc:18590755 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01350 13 17650710 17651704 Bach9g00127 9 877756 878963 BWGD