Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01327 ATGATTGGGAAGGTCCAATTCATAATCCAAAGCCGAGCTTGTCATTTTGCGCTTTATTTGCTTTTCAATGTTGATGATTGTGGGTTTCCCAATAAGGCCAAAGTCGATTCGAACGTCAATGGTAATAAGGAAGCTATTTCTAAGGATGATCAACTTTCTCAGGACGTCAAGGATTTAAATTTGAAAGAGGTTTCCAACGATGGAACAGGTCATGGTTACCGGGCGCAGACATTTACGTTCGATGAACTTGCTGCTGCAACAGGAAATTTTAGGCCTGACTGTTTTTTGGGTGAAGGAGGGTTTGGCAAGGTTTACAAAGGGCACTTGGATAGAATAAACCAGGTTGTAGCTATCAAACAACTTGACCCTAATGGACATCAAGGGGTTAGGGAATTTGTCGTTGAAGTGTTGACACTGAGTCTTGCAGACCACCCTAATCTTGTCGAATTGATCGGGTTTTGTGCTGAGGGAGAGCAGAGGCTATTAGTTTATGAATACATGCCATTAGGATCTTTGGAGAATCATTTGCATGATCTTCCACCTGGTAGAAAAGCTATTGATTGGAATACAAGAATGAAGATAGCAGCTGGGGCAGCTAGGGGTTTGGAATATTTGCATGATAAAATGAAGCCCCCTGTCATATACCGTGACCTAAAATGCTCAAACATTTTGCTAGGAGAGGGGTATCATCCTAAGTTATCTGATTTTGGCTTGGCAAAAGTTGGCCCAAGCGGTGATAAAACTCATGTTTCAACAAGGGTTATGGGCACATATGGGTATTGTGCTCCAGATTATGCAATGACAGGTCAATTGACATTCAAGTCAGATATTTACAGCTTTGGGGTCGTTCTTCTGGAGCTCATTACGGGCAGGAGAGCCATTGACCACAAAAAACCTGCCAGAGAACAAAATCTGGTTGCATGGGCGAGGCCTTTATTCAAAGACAGGAGAAAATTCCCACAAATGGTTGACCCATTGCTTGAAGGTCAATATCCAATGAGAGGTTTGTATCAAGCTCTTGCTATTGCTGCAATGTGTGTTCAAGAGGAGCCTAATATGCGGCCCGTTATAGCTGATGTGGTTACAGCCCTAAATTACCTCGCTTCCCAGAAATTTGATCGCCAAACTCAAACCAGTACAAAGCTTCAAAACAAGCCCGTCTTCTCCAAGAGCAAGGGATGA 1182 0.4298 MIGKVQFIIQSRACHFALYLLFNVDDCGFPNKAKVDSNVNGNKEAISKDDQLSQDVKDLNLKEVSNDGTGHGYRAQTFTFDELAAATGNFRPDCFLGEGGFGKVYKGHLDRINQVVAIKQLDPNGHQGVREFVVEVLTLSLADHPNLVELIGFCAEGEQRLLVYEYMPLGSLENHLHDLPPGRKAIDWNTRMKIAAGAARGLEYLHDKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRRAIDHKKPAREQNLVAWARPLFKDRRKFPQMVDPLLEGQYPMRGLYQALAIAAMCVQEEPNMRPVIADVVTALNYLASQKFDRQTQTSTKLQNKPVFSKSKG 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01327 393 Pfam Protein kinase domain 96 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g01327 393 SUPERFAMILY Protein kinase-like (PK-like) 76 374 IPR011009 -
Bach13g01327 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Bach13g01327 393 FunFam probable serine/threonine-protein kinase RLCKVII 62 166 - -
Bach13g01327 393 ProSitePatterns Protein kinases ATP-binding region signature. 96 119 IPR017441 GO:0005524
Bach13g01327 393 PANTHER OS07G0668900 PROTEIN 57 377 - -
Bach13g01327 393 Gene3D Phosphorylase Kinase; domain 1 61 166 - -
Bach13g01327 393 FunFam Serine/threonine-protein kinase PBS1 167 382 - -
Bach13g01327 393 CDD STKc_IRAK 96 365 - -
Bach13g01327 393 Gene3D Transferase(Phosphotransferase) domain 1 167 390 - -
Bach13g01327 393 SMART serkin_6 90 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g01327 393 ProSiteProfiles Protein kinase domain profile. 90 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01327 Bach-Chr13 17451997 17454118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01327 29 369 Glycoside Hydrolase AT3G07070 58.857 5.56e-146 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Bach13g01327 Pkinase 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01327 - - gmx:100804000 610.142