Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01323 ATGTTAGATCTTAATCTCAATGTGGATTCGACCGATTCGACTCAAAACGATGAATCAGTCATGTACCTCAACAAGTTTCCTGAAGTTTCTGGGAATCAAATGGCGGAATCGGGGACTTCCAATTCCTCTGTCGTCAATGCTGACGGGTCCAGCAATGGAGGAGGCGATGAAGACTCTTGCTCTACACGCACCGGCGAAGTTTACACCTTCAATTTCGATATCCTTAAGGTGGAAGGCGGGAACGACGCCGCAATCAAGGAGCTGTTTCCGGTGACTGGAGCAAGTGGTGTGGACGGAGAGTCCGGGAATTGGCAGGGACAGTCTTCGTCGTTGTTTCCATCGAGGAAGAGCAGGATGGATCTCTCATTCGATGATCCAGGTGGAAACGGAGAGATGAAGATGGTTCAGGTTCAGCAGCAACCTAAACAGCCCGTAAAGAAGAGCAGGAGGGGTCCAAGGTCTCGGAGCTCGCAGTACAGAGGGGTCACCTTCTACAGGAGGACCGGAAGATGGGAATCGCATATCTGGGACTGCGGGAAACAAGTCTATTTGGGTGGATTTGACACTGCTCACGCCGCTGCTAGAGCCTATGACCGAGCTGCTATTAAGTTCAGGGGAGTTGATGCTGACATCAATTTCAACCTCAGTGATTATGAGGAGGATCTTAAACAGTTGAAGAATCTTACCAAGGAGGAATTCGTGCACATACTTCGTCGCCAGAGTACTGGTTTCTCAAGGGGGAGCTCAAAATACCGAGGAGTAACACTGCACAAATGTGGCCGTTGGGAAGCGCGAATGGGACAATTCCTTGGCAAAAAGTATATATACCTTGGGCTATTCGACAACGAAGTAGAAGCTGCAAGGGCTTATGACAAGGCAGCTATCAAATGCAATGGAAGGGAGGCAGTGACTAACTTCGAGCCAAGTTCATATGAAGGGGAAATGAACCCCGAGTCCGTCGATGAAGGTTGTAGTTACAATCTTGACCTCAATTTGGGCATGGCGACCACTGCATCATGTGGCATTGGTCCCAAAGAAAACAGGGGACATCTTCAATTCCAAGCTGATCCTTACAATATGCATGTCGGAAGAATTTCAAGGATGGAGAGCAACTTTGGTTTAGGAATTAGTGATACGTCTTTGAAAAGGCTTGTAGGAACTGAAGAGCGTCCTTCTGTGTGGAATGGCATGCGTCCTAGTTTCTTTCCCAATGAGGAAAGAGCAGAGAGAATCAGTATAGGTCCCTCACAAGGACTCCCTAACTGGGCGTGGCAGACGCATGGCCAGGTCACTGCAACCTCAGTACCACCGTTCTCTAGTGCAGCATCATCAGGATTCTCGTTCTCAGCCACATTTCCATCGACTTCGGTTTTCCCAACAAGATCTACAAACTCAGTTCCACACAGTTTCTGTTTTACAGCATCCGGTGCAGCTGGCGCCAATACATCTCAATACTATCACCAAATGAAGTCCCCTCGTCCTCAGGCACCCCCCTAGCCCTATCTTTTATATCAGATGAAATACTGAGGGTAAAAAAGTATTTGCGTTGAAAACTCTTTGTATAATTCAGTTACTGATGGGTATGTACTGAGACTTGACATCTCATTGGCATACAATCGCTTGGCTTATAGAAACCATTATTCTCCGAGTTGGATACTTAATCTTTGTAGAAATGAATCAAGGAAATGCTAATTTCACCATAGCCTTATTC 1711 0.4699 MLDLNLNVDSTDSTQNDESVMYLNKFPEVSGNQMAESGTSNSSVVNADGSSNGGGDEDSCSTRTGEVYTFNFDILKVEGGNDAAIKELFPVTGASGVDGESGNWQGQSSSLFPSRKSRMDLSFDDPGGNGEMKMVQVQQQPKQPVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNLSDYEEDLKQLKNLTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDNEVEAARAYDKAAIKCNGREAVTNFEPSSYEGEMNPESVDEGCSYNLDLNLGMATTASCGIGPKENRGHLQFQADPYNMHVGRISRMESNFGLGISDTSLKRLVGTEERPSVWNGMRPSFFPNEERAERISIGPSQGLPNWAWQTHGQVTATSVPPFSSAASSGFSFSATFPSTSVFPTRSTNSVPHSFCFTASGAAGANTSQYYHQMKSPRPQAPP 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01323 498 MobiDBLite consensus disorder prediction 95 159 - -
Bach13g01323 498 SUPERFAMILY DNA-binding domain 157 215 IPR016177 GO:0003677
Bach13g01323 498 Gene3D AP2/ERF domain 157 215 IPR036955 GO:0003700|GO:0006355
Bach13g01323 498 Gene3D AP2/ERF domain 249 308 IPR036955 GO:0003700|GO:0006355
Bach13g01323 498 FunFam AP2-like ethylene-responsive transcription factor 157 216 - -
Bach13g01323 498 PRINTS Ethylene responsive element binding protein signature 289 309 IPR001471 GO:0003700|GO:0006355
Bach13g01323 498 PRINTS Ethylene responsive element binding protein signature 251 262 IPR001471 GO:0003700|GO:0006355
Bach13g01323 498 MobiDBLite consensus disorder prediction 31 60 - -
Bach13g01323 498 FunFam AP2-like ethylene-responsive transcription factor 249 309 - -
Bach13g01323 498 Pfam AP2 domain 158 206 IPR001471 GO:0003700|GO:0006355
Bach13g01323 498 Pfam AP2 domain 249 299 IPR001471 GO:0003700|GO:0006355
Bach13g01323 498 SUPERFAMILY DNA-binding domain 249 308 IPR016177 GO:0003677
Bach13g01323 498 ProSiteProfiles AP2/ERF domain profile. 158 214 IPR001471 GO:0003700|GO:0006355
Bach13g01323 498 MobiDBLite consensus disorder prediction 98 116 - -
Bach13g01323 498 ProSiteProfiles AP2/ERF domain profile. 250 307 IPR001471 GO:0003700|GO:0006355
Bach13g01323 498 CDD AP2 158 216 IPR001471 GO:0003700|GO:0006355
Bach13g01323 498 CDD AP2 249 309 IPR001471 GO:0003700|GO:0006355
Bach13g01323 498 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 120 338 - -
Bach13g01323 498 SMART rav1_2 250 313 IPR001471 GO:0003700|GO:0006355
Bach13g01323 498 SMART rav1_2 158 220 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01323 Bach-Chr13 17394493 17398039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01323 1 498 AP2-EREBP Transcription Factor Family AT5G60120 44.612 2.60e-105 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bach13g01323 AP2 9.8e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01323 K09284 - qsa:O6P43_000276 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01323 13 17394493 17398039 Bach9g00151 9 1051807 1055205 BWGD
Bach13g01323 13 17394493 17398039 Bach13g01323 13 17394493 17398039 ECH