Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01301 ATGGAAATTGATCTGAATCATTCAGTGAGTGAGGTTGAGAAGAATGCGTTTTGTAATGAAGAGGTTGAGAAGGGTGCTTGCGTTTGTTGTTTGCCCTCTTCGACTTGTTCCTCTTGTTCTAGTTCTTCTTCAGCTCATGTGTCCTCTTCTTACATGGAGCTTTGGCATGCTTGTGCTGGCCCCCTCACCTCCCTGCCTAAGAAAGGAAATGTGGTGGTCTATTTTCCACAAGGTCACTTAGAACAGGTGGCCTCTTTCTCTCCTTTCTCCCCTTTAGAGATACCAACCTATGATCTTCAACCACAGATCTTTTGCAAGGTTGTCAATGTTCAGCTACTTGCTAATAAGGAGAATGATGAGGTTTATACGCAGGTTACCTTGCTTCCCGAGGCAGAGTTGGCAGGGTTGCATTCAGAGGGGAAGGAGCTTGAGGAATTGGGAGTTGATGAAGATGGAAATGGAGGATCACCTACTAAATCAACTCCTCACATGTTCTGCAAAACGCTTACAGCTTCTGATACCAGCACCCACGGGGGTTTCTCTGTTCCTCGTAGAGCTGCTGAAGATTGTTTTCCTCCTCTGGATTACAAGCTGCAAAGACCCTCTCAAGAGCTTGTTGCAAAGGACCTGCATGGAGTGGAGTGGAAATTTCGCCATATCTACAGAGGTCAGCCGAGGCGACATCTGCTAACTACTGGCTGGAGTATTTTTGTTAGTCAGAAGAATCTTGTTTCTGGCGATGCGGTGCTCTTTCTAAGGGGCGAAAATGGAGAATTGAGATTGGGAATCAGAAGAGCTGTTCGACCTAGAAATGGTCTTCCTGAATCAATTGTTGGCAACCAGAATTGTTATCCCAATTTTCTTTCTCCTGTGGCTAATGCTATATCCACCAAAAGCATGTTCCATGTTTTCTACAGTCCAAGAGCGAGTCATGCAGAGTTTGTTGTGCCCTACCAAAAATATGTCAAAAGCATCAAGAACCCAGTGACCATTGGAACAAGATTCAAAATGAAGTTTGAGATGGATGAAGCTCCCGAAAGAAGGTGCACTGCTGGTATAGTGACTGGAATAGGTGATTTGGATCCCTATCGATGGCCTAAATCAAAATGGAGGCGCTTGATGGTGAGATGGGATGAGGATATTTCTAGTAATCATCAAGAACGAGTTTCTCCATGGGAGATTGACCCTTGTGTTTCTCTCCCTCCATTGAGCCTTCAGTCTTCCCCAAGACTGAAGAAATTGAGGACAGGTCTGCAGGGTGCCTCACCCAGCCACTTCATCACTGGAGGCAGTGGGTTTATGGACTCTGAGGAGTCTATAAGATCACCCAAGGTCTTGCAAGGTCAAGAAAATACAGGTTTTGTGCCACTCTATTATGGATGTGACACAATAACCAACCGGCCAGATTTTGAGATGAATTCTTCTAGTCATCACAATTTTACATCAACTGGCATAATAAATACCAGAGCTACTGGACTCATGAAGGCTCAGGCTTACCCTTTTAGTTATGCAGGATTAGCGGAAACTAACAGATTACCGAGGGTCTTGCAAGGTCAAGAAATATGTCCATTGAATTCCCTGACTCTGACAGGAAAGGTTGACTTTAACCTTGGTGCTTATGGTTGGGGTAAAACCAATGTGGGTTGCAAGACTTTCAACATGCATCAGGCACCCAAACCCAACTTTAACCCTTTAGGACCACAGCTCATTCAAACTGCATATTTTCCTTATGGTGACATAAACATTCACAAGGCTGGTCAAGGTAGCATCTTGTGCTCTAAATCAAGTAATTTCCAGAGAGAGAATATGCCATTTAACACCTGTTCCACTCAGAGAAATGAAGATATTCTGAACGAGCAGAAGCTGCAGGACAATGTCTCTGCTGCTACGTTAGGGGGAAATGCGTTGATTGAGAATGAAGACAAGTTCAAAGGTAAGGTAAATGGAAATGCCTGTAAACTATTTGGGTTCCCCTTGTCTGGGGAAAGTACAAGTCAGAATTCGGCTACTAAAAGGAGTTGCACAAAGGTTCACAAGCAAGGCAGCTTAGTTGGAAGAGCCATTGACCTCTCAAGATTGAGCAGCTACAATGACCTGATGGGTGAACTAGAGCGACTATTTGGCATGGAAGGCCTTCTAAGAGATCCCAATAAGGGGTGGAGGATCCTCTACACAGACAGCGAAAAAGACATCATGGTTGTAGGGGATGACCCATGGCATGAATTCTGCAATGTGGTAACCAAGATCCATATATATACCCAAGAAGAAGTAGAGAAGATGACGATAGGGATGATGAGTGATGATACCCAGAGTTGTTTGGAGCAGGCACCATTGATAATGGAAGCTTCAAAGTCTTCTTCGGTGGGGCAGCCAGATTCTTCTCCAACAGAAGTCAGGGTCTAAGTTTCTACGCAATTTAATCCACATCTTATCTACATATATTAATTATATTCTGATTAACTCTTGAGCACCTATTTGCATTGCCAGAGCATGAAAGACTGACAGCTAAAGCGAACAAAACTTGCCAAATAAGGCCACAACACAAATAAATCATCAGATCTGAGTTAGAAGTATGATTTAAATGAATATTATTTATTAGTTATTACAACATAGCATGTCCAAATGAAACCTTGTCATTGTTCTTTGAAGAGTTCGCGTCCAATAATGATTCTTCTGATCTCACTATTCCTG 2691 0.4329 MEIDLNHSVSEVEKNAFCNEEVEKGACVCCLPSSTCSSCSSSSSAHVSSSYMELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASFSPFSPLEIPTYDLQPQIFCKVVNVQLLANKENDEVYTQVTLLPEAELAGLHSEGKELEELGVDEDGNGGSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKLQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNGLPESIVGNQNCYPNFLSPVANAISTKSMFHVFYSPRASHAEFVVPYQKYVKSIKNPVTIGTRFKMKFEMDEAPERRCTAGIVTGIGDLDPYRWPKSKWRRLMVRWDEDISSNHQERVSPWEIDPCVSLPPLSLQSSPRLKKLRTGLQGASPSHFITGGSGFMDSEESIRSPKVLQGQENTGFVPLYYGCDTITNRPDFEMNSSSHHNFTSTGIINTRATGLMKAQAYPFSYAGLAETNRLPRVLQGQEICPLNSLTLTGKVDFNLGAYGWGKTNVGCKTFNMHQAPKPNFNPLGPQLIQTAYFPYGDINIHKAGQGSILCSKSSNFQRENMPFNTCSTQRNEDILNEQKLQDNVSAATLGGNALIENEDKFKGKVNGNACKLFGFPLSGESTSQNSATKRSCTKVHKQGSLVGRAIDLSRLSSYNDLMGELERLFGMEGLLRDPNKGWRILYTDSEKDIMVVGDDPWHEFCNVVTKIHIYTQEEVEKMTIGMMSDDTQSCLEQAPLIMEASKSSSVGQPDSSPTEVRV 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01301 800 Gene3D - 329 401 - -
Bach13g01301 800 CDD B3_DNA 163 265 IPR003340 GO:0003677
Bach13g01301 800 Pfam Auxin response factor 291 373 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bach13g01301 800 FunFam Auxin response factor 163 267 - -
Bach13g01301 800 FunFam Auxin response factor 328 401 - -
Bach13g01301 800 SMART B3_2 165 267 IPR003340 GO:0003677
Bach13g01301 800 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 50 761 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bach13g01301 800 Gene3D - 667 761 - -
Bach13g01301 800 Gene3D - 163 267 IPR015300 -
Bach13g01301 800 SUPERFAMILY DNA-binding pseudobarrel domain 157 276 IPR015300 -
Bach13g01301 800 ProSiteProfiles PB1 domain profile. 672 754 IPR000270 GO:0005515
Bach13g01301 800 FunFam Auxin response factor 667 761 - -
Bach13g01301 800 Pfam AUX/IAA family 666 756 IPR033389 -
Bach13g01301 800 ProSiteProfiles B3 DNA-binding domain profile. 165 267 IPR003340 GO:0003677
Bach13g01301 800 SUPERFAMILY CAD & PB1 domains 663 751 - -
Bach13g01301 800 Pfam B3 DNA binding domain 165 266 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01301 Bach-Chr13 17224055 17228278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01301 47 800 B3 DNA Binding Superfamily AT5G60450 62.254 0.0 867
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bach13g01301 AUX_IAA 1.3e-06 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01301 - - gmx:100812909 1228.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01301 13 17224055 17228278 Bach9g00172 9 1206742 1210635 BWGD
Bach13g01301 13 17224055 17228278 Bach13g01301 13 17224055 17228278 ECH