Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01296 GTTTTAGGACATACCCACTTAGTATTCCCTCAAAATTTCAGTTCCCAAAAGATGATGTCCGAAGAAGCGCTTTCGTTTCCTTCCACTGTCAGAGGATTCGTTCAAGACCCAAACTCAACCCCTTGCTCTACTCCTAGCCCTAATTCAAATCCAGTTGTCAAGAGGAAGAGAAGTCTTCCAGGAACACCAGATCCAGATGCAGAAGTGATAGCTCTATCGCCAAAGTCTCTGATGGCGACGAACCGTTTCATTTGTGAAATCTGCAATAAGGGTTTCCAGAGAGACCAGAACTTGCAACTTCACCGTCGTGGGCATAACCTTCCATGGAAACTCAAGCAGAGAACGAACAAAGAAGTGATCAGGAAGAAGGTCTACGTGTGCCCTGAAAAGAGCTGCGTGCACCATGACCCTTCCAGAGCCCTCGGAGACCTCACAGGGGTAAAGAAACACTACAGTAGAAAGCACGGTGAGAAGAAGTGGAAGTGTGACAAGTGTTCAAAGAAATACGCAGTTCAATCAGATTGGAAGGCCCATAGCAAGATTTGTGGGACTAGAGAGTACAAATGTGACTGTGGCACCCTTTTCTCCAGGAAGGACAGCTTCATAACACATAGAGCATTCTGTGATGTCTTGGCTGAAGAAAGTGCCAGAATAGCAGTTCCAGCGCCCTTTAAAAGCTTCAGAACTGAGTTAATGAACGGAGCAAGACACCATCCTCCAGCACCGAGAATCCCTCATATTCTTGGTGGGTTTCATCCAGAATTTAGCGGGTCAGAAGCATTGGGGAATTTTTCAGATGCTGGTGAGCAGAAGCTAAGGCTGCCTCTATGGCTAGACCAGACCAATTCTCATCTTAACCCACTTAGTTTTTCAAGCAATTCTACTGCTTTCTCAGGAGCAAATCCTGCTTGTAGTTTGCCAGATTTAGTGCAAACGATGAATATGTTTGGGTCATCATCACAGCCGCAGACGCAGTGGTTGAACCGATACTCAGAAGCATCATATACAAGTGCCAATTTAACTATGTCTCCACTGCCACATGGACTGAAGCAAGAACAAGAAGAAAACAAAGCAATCTTGTCACATAGCGCAAGCAATTTGTTTTCTGGTATGGAGGCACAGGGAGGCCCAGCTCACATGTCAGCTACTGCACTCTTGCAGAAAGCAGCCCAAATGGGATCTACAAGGAGCAACAACAACCACAATAATGACTCACTCTTCAACTCTAGCAACATCTTTGGGTTGATGGGCCCAACTCTCTCAAACACCAACAGATCAAGTAGTGTTGAGGTTCAGAAGTTGTTCAATCAAGCAACTCAAACTGAAAACTTGAACGAGTTGATGGTCAATTCCCAAGCAAGCAACAACCTTGGAGGAGGTGGGTTTTTATTGAATGATTCCTTCTCAAGCTCGCTTGTGAATACTACAAGTAAGAATTTTGATCATACGGTAATGACGGAGAATGAAAACCGAGCAGCAATTGTGGGAAAGCATCTGCATTCAAGCTCAAATGAAGATGAGCTGAGTTTAACCAGAGACTTTCTAGGAGTTGGAGGTGATCACCCAATGAGTAGGCCATTCCTGCAGCAAGAGCTGGCTAACTTCAATGCAATTGGCTTGGCCATGGACGTGAGCCATTATGGTGACCACCACTGA 1656 0.4535 MSEEALSFPSTVRGFVQDPNSTPCSTPSPNSNPVVKRKRSLPGTPDPDAEVIALSPKSLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKEVIRKKVYVCPEKSCVHHDPSRALGDLTGVKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRKDSFITHRAFCDVLAEESARIAVPAPFKSFRTELMNGARHHPPAPRIPHILGGFHPEFSGSEALGNFSDAGEQKLRLPLWLDQTNSHLNPLSFSSNSTAFSGANPACSLPDLVQTMNMFGSSSQPQTQWLNRYSEASYTSANLTMSPLPHGLKQEQEENKAILSHSASNLFSGMEAQGGPAHMSATALLQKAAQMGSTRSNNNHNNDSLFNSSNIFGLMGPTLSNTNRSSSVEVQKLFNQATQTENLNELMVNSQASNNLGGGGFLLNDSFSSSLVNTTSKNFDHTVMTENENRAAIVGKHLHSSSNEDELSLTRDFLGVGGDHPMSRPFLQQELANFNAIGLAMDVSHYGDHH 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01296 533 MobiDBLite consensus disorder prediction 1 37 - -
Bach13g01296 533 Pfam Zinc-finger double-stranded RNA-binding 65 87 IPR022755 -
Bach13g01296 533 SUPERFAMILY beta-beta-alpha zinc fingers 64 162 IPR036236 -
Bach13g01296 533 Gene3D Classic Zinc Finger 44 117 - -
Bach13g01296 533 MobiDBLite consensus disorder prediction 1 48 - -
Bach13g01296 533 FunFam protein indeterminate-domain 12-like 44 113 - -
Bach13g01296 533 SMART c2h2final6 65 87 IPR013087 -
Bach13g01296 533 SMART c2h2final6 142 162 IPR013087 -
Bach13g01296 533 SMART c2h2final6 107 137 IPR013087 -
Bach13g01296 533 ProSiteProfiles Zinc finger C2H2 type domain profile. 65 87 IPR013087 -
Bach13g01296 533 ProSitePatterns Zinc finger C2H2 type domain signature. 67 87 IPR013087 -
Bach13g01296 533 Gene3D Classic Zinc Finger 118 199 - -
Bach13g01296 533 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 23 507 IPR031140 -
Bach13g01296 533 FunFam protein indeterminate-domain 5, chloroplastic-like 120 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01296 Bach-Chr13 17189157 17191162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01296 35 375 IDZ Gene Family AT3G45260 53.134 1.98e-117 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach13g01296 zf-C2H2_jaz 7.9e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01296 K25870 - qsu:112038579 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01296 13 17189157 17191162 Bach13g01296 13 17189157 17191162 ECH