Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01292 ATGGGATGCTGTAATTGTTTTGGGTTCATCAGAAAACCTAATCGTCCAAGTGCTAAGACTAGCACAAATAATAATCTCACTGAGGAGCTATTGTTGGATGAAGACATAGAAGATGATGATGTCTCATATAATGCCGAGGCTACTAACTCCAGTAATGGAGATGATAGTGAAGTACCAACTCGAGCAAAAAGTTCTGAGGAAATTTTGAACTTTAGAGCAGAGAATGGTATGAATTGTAGGCAGTTTCCTGTTAAGGAAACTCACCAAGTCATTTGCACAGAGGATGAAAATGGCAAGAAGATGATAAATGAGTATGTTCGTGAGTGTAGGATTGGTTCTGGTAGCTATGGGAAAGTGGTTCTATATCAAAATCTTCTAGATGGAAATCATTATGCAATGAAGGTAAAGCTCCTTGTTCTGTTGAGAAGGCTATGCATTACTGCATGGTGGCTTGCCTTTCATAAGTCTCATTTACTGAAGCTTCGAGTTGCACCCTCAGAGACTGCCATGACTGATGTGCTGCGTGAGGTTCTTATTATGAAAATGGTGGAACATCCTAATATAGTTAATCTCATTGAGGTTATTGATTCCCCAGATTCGGATCGCTTCTACATGGTGCTTGAATATTTGGAAGGCAAATGGGTATTTGAGGGCAGTGGTCCTGCTTGTCGCTTAGGTGAAGAGACTGCTAGGAAATACATGCGAGATATTGTCTCCGGATTAACATATCTCCATGCTCATAATATAGTGCATGGCGATATAAAACCTGATAATCTGTTGGTTACACGTCATGGTACTGTAAAGATAGGGGACTTCAGTGTGAGCCAGGCTTTTGAGGATGATAATGATGAGCTTCGTCGATCACCTGGTACTCCTGTTTTCACTGCACCAGAATGCTGTTTAGGTCTTACCTATCATGGTAAAGCTGCAGACACATGGGCGGTAGGAGTTACATTGTACTGTATGATATTGGGTCAATACCCATTTCTTGGAGACACACTTCAGGATACATACGACAGAATAGTCAATAATCCTCTAGTACTGCCAGATGATATGAACCCACAGCTAAAGAATTTGCTAGAAGGACTACTTTGCAAAGACCCTAGAATGAGGTTGACACTGCGTGATGTTGCGGAGCATAGCTGGATTATTGGAGAATATGGGCCAATTCCTGAGTACTTGTGTTGGTGCAGACGCATGAACTTGGAGAGGGGAGACTCTAATAGGAGCGATATACTTGCTTGA 1245 0.4169 MGCCNCFGFIRKPNRPSAKTSTNNNLTEELLLDEDIEDDDVSYNAEATNSSNGDDSEVPTRAKSSEEILNFRAENGMNCRQFPVKETHQVICTEDENGKKMINEYVRECRIGSGSYGKVVLYQNLLDGNHYAMKVKLLVLLRRLCITAWWLAFHKSHLLKLRVAPSETAMTDVLREVLIMKMVEHPNIVNLIEVIDSPDSDRFYMVLEYLEGKWVFEGSGPACRLGEETARKYMRDIVSGLTYLHAHNIVHGDIKPDNLLVTRHGTVKIGDFSVSQAFEDDNDELRRSPGTPVFTAPECCLGLTYHGKAADTWAVGVTLYCMILGQYPFLGDTLQDTYDRIVNNPLVLPDDMNPQLKNLLEGLLCKDPRMRLTLRDVAEHSWIIGEYGPIPEYLCWCRRMNLERGDSNRSDILA 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01292 414 ProSitePatterns Protein kinases ATP-binding region signature. 111 134 IPR017441 GO:0005524
Bach13g01292 414 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 59 387 - -
Bach13g01292 414 Gene3D Transferase(Phosphotransferase) domain 1 95 399 - -
Bach13g01292 414 SMART serkin_6 105 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g01292 414 FunFam Serine/threonine-protein kinase GRIK2 95 411 - -
Bach13g01292 414 SUPERFAMILY Protein kinase-like (PK-like) 90 396 IPR011009 -
Bach13g01292 414 CDD STKc_LKB1_CaMKK 111 383 - -
Bach13g01292 414 ProSiteProfiles Protein kinase domain profile. 105 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g01292 414 Pfam Protein kinase domain 169 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g01292 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01292 Bach-Chr13 17153138 17157391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01292 99 390 CBL-interacting serine-threonine protein kinases AT5G35410 31.973 1.91e-43 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Bach13g01292 Pkinase 1.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01292 K00908 - zju:107411351 615.15