Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01288 TTTCTCCCTCCCTCAACCTTGTTCTCTCACTCTCATCCGTCTCTCTCTCTCTCTGTATGTCTTCGCTTGAGGGTGGGTGTGTATGGCTTTGTTACTGAAGTAGGATATAACAAAGTGATAAGGGTAATCTTGATGTCTTAAAGGAGTGAAATTTGTTTCCTCTTGTGGTTTGTCTGTGAATTCCAAGTAGTGGGTTAGTTTTCTTACGCCAAAATGAGTACTGAGGAAAAACCAGAGGGTGACTGGCATGATGCGGCTTCCTGCAGAAGAACAGTTTCTCTTCCAGTTGAAAAGGTTGATATTCCAATGGGAGTAGCTGAAGAATCCACGCATGTTCATCATGGGAAGCGACCGGATCTTGTCCTGGAAACCCCCCCACGAACAACAGAAGAGTCTTCTCAGGACTTTGTCAAAATCAAGATGCCTATGACACCAAGTCCCTCTCCCACTCCAAAGAGAGTGAATTTTCTTGTGTCTTCTCGCTCTGTTGATCTTCCCAATTGTAACGCTCCAGCGCCTTCCTTGCAGAGAGCCAAATCTTCCATAAGAAATTTTCTACCGAAATTGAACTTCATTTATAGGTCATCAGATCCTGAAAAAGATCCTACTGCGGCTCTGGAAAGTTCCTCTTCAGGCCTTCAAGAAAAACCTTCCATCTCGAGATCATTATCACTTACTAAGATATTTACTCCTAACATCAAGCGAACATCATCATTGCCTGTGGATCAAAATCCACGCTTAGACCCAGAATCTGCTCATGGTGGAGTTGCTCAGAGAAGAGAGTGCCAAGTTCAGATAGCACGCTCTCTTTCAGTGCCTGTCCTCGACAAAGAAAATAACTTGAGGAGAATGGATTCATTTTTCCGTGTTATCCCTTCCACCCCTCGAGTGAAGGAAGGAAATGAAACATTGACCAAATCTCCAATAGCGGATTCTGAAAACGATGATTCGGATGCTGAAGATATATCTGAAGAAGAGGCGGTGTGTAGAATTTGTCTACTTGAGCTATGTGAAGGAGGTGATACCTTCAAAATGGAATGCAGCTGCAAAGGTGAACTTGCTCTGGCTCACCAAGAATGTGCAATTAAATGGTTCAGCATCAAGGGGAACAAGATCTGTGACGTGTGCAAGGAGGAGGTTCGAAACCTATCAGTCACTCTCTTACGGATCCAAAGCGTCCGCACTCGAAATACTGGAGCAAGTGGATCTCAGCTGGCAGACGTAAATGGATACAGGGTTTGGCAGGAGGTGCCGGTGCTTGTCATTGTCAGCATGCTTGCCTATTTCTGTTTCCTTGAACAGCTATTGGTTGGAAAAATGGGTACTGGTGCAATTGCTATATCTCTGCCCTTTTCCTGTGTATTGGGTCTACTCTCCTCCATGACATCTTCAACCATGGTGAAAAGCAGGTTTATCTGGATTTATGCATCTGCCCAGTTTGCTCTGGTGGTTCTCTTTGCTCATTTGTTTTACTCCTTGGTTCATGTGCAAGCAGTTCTGTCAATCCTCCTTGCGACATTTGCTGGGTTCGGTGTGGTGATGAGTGGGAGTTCTATTCTTGTTGAGTTTTTCAGATGGAGAAGAAGATGGCAATCAGATCAGCGTCATGGTTCTCAGGTGATGACACGAGCAGGACTTAACCATACAGCTCTAAATATAACACATGCTGGCCCTGCCAACCACAGCTGAATCCTGAAGCCAATTTGAAAGGGTTGCAGCCAGTTACGTTTCATTCAGGATAAAGCAAAATTTGTAGGATAGTTAGTGTCAGGAGGAATATGAATACTTCACATCTATACAAGACTTCATTGTACAGGTCATGTTGTAGTAATAGAATGAGTTAATTGTAGCTTTTCCTAGTCTTGAAGGTTTCTTTTTTTTTGGGTGTTCATACTAACTACTGAGCATTTCATTTCAGTGTATCAAAGTCAGAAGGCTCCTTGCCTTCTTTTTTGTAGTCTTGTGGTCTGAAACAAGGAGTGAGGAATTTTATTTGCTAAACTCATGGGATGTATTATAGGCCTGATAGATTAATGGCAAACTCGGTTTGGCTTGAA 2057 0.4332 MSTEEKPEGDWHDAASCRRTVSLPVEKVDIPMGVAEESTHVHHGKRPDLVLETPPRTTEESSQDFVKIKMPMTPSPSPTPKRVNFLVSSRSVDLPNCNAPAPSLQRAKSSIRNFLPKLNFIYRSSDPEKDPTAALESSSSGLQEKPSISRSLSLTKIFTPNIKRTSSLPVDQNPRLDPESAHGGVAQRRECQVQIARSLSVPVLDKENNLRRMDSFFRVIPSTPRVKEGNETLTKSPIADSENDDSDAEDISEEEAVCRICLLELCEGGDTFKMECSCKGELALAHQECAIKWFSIKGNKICDVCKEEVRNLSVTLLRIQSVRTRNTGASGSQLADVNGYRVWQEVPVLVIVSMLAYFCFLEQLLVGKMGTGAIAISLPFSCVLGLLSSMTSSTMVKSRFIWIYASAQFALVVLFAHLFYSLVHVQAVLSILLATFAGFGVVMSGSSILVEFFRWRRRWQSDQRHGSQVMTRAGLNHTALNITHAGPANHS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01288 491 Pfam RING-variant domain 258 305 IPR011016 GO:0008270
Bach13g01288 491 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 242 315 IPR013083 -
Bach13g01288 491 PANTHER OS02G0165000 PROTEIN 36 469 - -
Bach13g01288 491 SUPERFAMILY RING/U-box 253 309 - -
Bach13g01288 491 CDD RING_CH-C4HC3_MARCH 258 306 - -
Bach13g01288 491 MobiDBLite consensus disorder prediction 35 64 - -
Bach13g01288 491 MobiDBLite consensus disorder prediction 227 247 - -
Bach13g01288 491 MobiDBLite consensus disorder prediction 125 147 - -
Bach13g01288 491 MobiDBLite consensus disorder prediction 36 53 - -
Bach13g01288 491 MobiDBLite consensus disorder prediction 165 185 - -
Bach13g01288 491 SMART ringv_2 257 306 IPR011016 GO:0008270
Bach13g01288 491 ProSiteProfiles Zinc finger RING-CH-type profile. 250 312 IPR011016 GO:0008270
Bach13g01288 491 MobiDBLite consensus disorder prediction 131 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01288 Bach-Chr13 17128007 17132168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01288 251 361 C3H Transcription Factor Family AT5G05830 36.290 2.66e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01288 - - gmx:100815566 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01288 13 17128007 17132168 Bach9g00182 9 1293610 1297804 BWGD
Bach13g01288 13 17128007 17132168 Bach13g01288 13 17128007 17132168 ECH