Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01278 ATGAAGGAAACTGAGAAGAGCTTGGATCCGCAACTATGGCACGCTTGCGCTGGAAGTATGGTTCAGATGCCTCCCGTGAACTCAAAAGTCTTCTACTTTCCTCAAGGGCACGCTGAACATGCGCAGCCACAGGCCAACGTTGATTTTGCGGCCTCCTTAAGCTTGAGGGTTCCACCGCTCATTCTTTGCCGAGTGGAAGCTGTAAACTTCTTGGCAGACCCAGAAACTGATGAAGTTTATGCAAGGGTAAAGTTAATTCCCTTAAGAAACTCGGAGGTTGACTATGATGATGATGGGGTTGTTGAGAGTAATGGATCTGACAATTCCGAGAAGCCAGCATCTTTTGCAAAGACATTAACACAATCTGATGCCAACAATGGTGGAGGGTTCTCGGTTCCAAGGTACTGTGCTGAAACTATTTTTCCGCGTTTGGATTACTCTGCAGACCCACCAGTTCAAACTGTGATTGCGAAGGATGTTCATGGTGAAATTTGGAAATTTAGACATATCTACAGAGGAACACCTCGTAGGCACTTACTAACAACTGGGTGGAGCACTTTCGTGAACCAGAAGAAACTTGTTGCAGGGGATTCTATCGTGTTTCTGAGGGCTGAAAATGGGGATCTCTGTGTTGGAATTCGTCGAGCTAAGCGGGGAATTGGCGGCGGATCAGAAGCCCCATCTGGGTGGAGCCCTGGTCCCGGTAATTGTGTTGGACCCTATGGTGCTTTTTCTGTTTTCTTGAGAGAAGAGAACAAGTTACTGCGTAGTGGTTCAGGCCCTGGGGGCAATTTGAGTGTAAGGTCAAGAGTGAGACCTGAATCTGTGATGGAAGGTGTGAGGCTTGCTGCAAATGGGCAGCCATTTGAATTTGTTTATTACCCGAGAGCAAGCACTCCCGAGTTCTGCATTAAGGCTGCAGCTGTCACGGCAGCAATGAGAACTCAGTGGTGCTCTGGGATGAGGTTTAAGATGGCCTTTGAAACTGAGGATTCTTCTCGGATTAGCTGGTTCATGGGTACCATAGCTTCTGTTCAGGTTCTTGATCCTATACGCTGGCCAAATTCCCCATGGCGACTTCTCCAGGTTACTTGGGATGAGCCAGATTTGCTACAAAATGTGAAGCGTGTTAGCCCATGGCTGGTTGAACTGGTATCAAATATGCCAGTGATCCATCTCACATCCTTCTCTCCACCGAGGAAGAAGGCGCGGCTTCCACAGCACCCAGATTTGTCCTTTGACGGTCACTTTGCAATACCAACGTTTTCAGGCAACCCCATTGGGCCAAGCAGTCCCTTGTGTTGTCTATCTGATAATGCTCCTGCAGGCATACAGGGAGCCAGGCATGCTCAATATGGAAGATCTCTTTCAGATCTCCACCTCAACAATAAACTGCCCTTGGGGCTGCTTCCATCCAATGTTCAGCAGTTCGATGTGCATTCTGGGATTTCTAATGCCAATCTCATCAAGCATGAGACCTCCAATGAAAACTTGTCATGCTTGCTTACTATTGGAAATTCTAATAAGACTTTGGAGAAATCTGATAAAGTAAAGAGACACCAGTTTTTTCTTTTTGGTCAACCAATACTCACTGAGCAACAAATCTCTCGAACCTGTTCTGTTGATGCGTTTTCTCAGAATACCCGAAAAGCTTCACCATATGAGGATAAAGACAAAGCAAAGTGTTTCTTTGGTAATTCTGAATCTGCACTTTCGCAGCAGTTTTCACCAGAGAAATCTTCGACTGCTGAGATTTCTTGGCAACTTGGTTTGGATACTGGTCATTGCAAGGTTTTCATGGAGTCAGAAGATGTGGGACGAACCCTAGACCTATCAAGACTCGGTTCTTATGAAGAGCTGTACAGGAGACTCGCCAACATGTTTGGAATTGAAAGCTCTGATAAGTTGAGTCATGTGCTCTACCGTGATGCAACAGGTACTGTTAAGCAAACTGGAGAAGAACCATTCAGTGATTTTATGAAAACAGCAAAACGGTTGACAATTCTGACAGATTCAGGCGGCAAAGACATGAGGAGGACCTGGATTACTGGTACTCGGAATGGTGAACATGGAATAGATGCATCAAACAAGACTGGTCCGCTCAGCATATTTGCTTGATTAGTATGCTGTGGGTTTGATTAATAGTTGAAAGAGACATAATTAGCGCTTTGTTTACTTATGGAGAAACTCAATATGAACTGAATCCTTATCATGGTTGCCATCTTTTCCTTTCCTTTTTAAGTGTCTATATGTCCCAACTAATAATGATGCCTATTTTGGAAATCATGGTCAACTATCATTGTAATATTGACCAAGACAATATTTCCTTGTCAT 2334 0.4477 MKETEKSLDPQLWHACAGSMVQMPPVNSKVFYFPQGHAEHAQPQANVDFAASLSLRVPPLILCRVEAVNFLADPETDEVYARVKLIPLRNSEVDYDDDGVVESNGSDNSEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGGSEAPSGWSPGPGNCVGPYGAFSVFLREENKLLRSGSGPGGNLSVRSRVRPESVMEGVRLAANGQPFEFVYYPRASTPEFCIKAAAVTAAMRTQWCSGMRFKMAFETEDSSRISWFMGTIASVQVLDPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLTSFSPPRKKARLPQHPDLSFDGHFAIPTFSGNPIGPSSPLCCLSDNAPAGIQGARHAQYGRSLSDLHLNNKLPLGLLPSNVQQFDVHSGISNANLIKHETSNENLSCLLTIGNSNKTLEKSDKVKRHQFFLFGQPILTEQQISRTCSVDAFSQNTRKASPYEDKDKAKCFFGNSESALSQQFSPEKSSTAEISWQLGLDTGHCKVFMESEDVGRTLDLSRLGSYEELYRRLANMFGIESSDKLSHVLYRDATGTVKQTGEEPFSDFMKTAKRLTILTDSGGKDMRRTWITGTRNGEHGIDASNKTGPLSIFA 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01278 705 FunFam Auxin response factor 317 390 - -
Bach13g01278 705 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 6 677 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bach13g01278 705 Gene3D - 317 389 - -
Bach13g01278 705 FunFam Auxin response factor 113 217 - -
Bach13g01278 705 ProSiteProfiles PB1 domain profile. 593 673 IPR000270 GO:0005515
Bach13g01278 705 Gene3D - 113 217 IPR015300 -
Bach13g01278 705 Pfam B3 DNA binding domain 115 216 IPR003340 GO:0003677
Bach13g01278 705 SMART B3_2 115 217 IPR003340 GO:0003677
Bach13g01278 705 ProSiteProfiles B3 DNA-binding domain profile. 115 217 IPR003340 GO:0003677
Bach13g01278 705 SUPERFAMILY DNA-binding pseudobarrel domain 109 219 IPR015300 -
Bach13g01278 705 Gene3D - 592 678 - -
Bach13g01278 705 CDD B3_DNA 114 215 IPR003340 GO:0003677
Bach13g01278 705 Pfam Auxin response factor 281 362 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01278 Bach-Chr13 17027002 17029707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01278 4 677 B3 DNA Binding Superfamily AT4G30080 59.357 0.0 756
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bach13g01278 B3 2.7e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01278 - - qsa:O6P43_028379 1142.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01278 13 17027002 17029707 Bach9g00197 9 1407224 1409740 BWGD
Bach13g01278 13 17027002 17029707 Bach13g01278 13 17027002 17029707 ECH