Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01272 ATGACTTTTGGTAATTCAAGATCTGTAAGATTTCAAGATGATCTTGAAGTAGCAAAAATCCCTGTGGCTAACGGTGAAAATGGGATGAAGCTCAAATACAACATTGATGGAACACAAATACCTGAGTCTAGCACCAATAAGGATCAGAAGAAGGTGACAGGGAAGGCTGGAAAGTTCTTGAAAGCTAAAGTATTGACAAGAGTATTCTCAGAGGATTATGAGAGAGTCAAAAGAAAAATACTAGATCCTCGGGGGCAAACAATTCACCGGTGGAACAAGATTTTCTTGGTAGTGTGTTTAGCATCCTTGTTTGTGGACCCTCTCTTCTTTTATTTGCCAGTAGTTCGAGATGAAGTATGCATTAATATTGGAATAACGCTTGAAGTTATCCTCACAATCATCAGAACAATGGCGGATATATTTTACATGATTCAGATTTTCATGAGGTTTCGTACAGCTTATGTTGCTCCCTCTTCTCGAGTATTTGGGAGAGGAGAGCTGGTTATAGATTCTTCAAAGATAGCATGGAAGTACTTATGTAAAGGTTTCTTGTTAGACTTCATCGCTGCCCTGCCCCTTCCGCAGGCATTAATTTGGTTTGTCATCCCCAATCTTAGGGGTTCAACCATGGCAAACACAAAAAATGTCCTACGGTTTACCATCATTTTTCAGTATCTCCCGAGACTCTTTCTGATTTTTCCATTGTCATCACAAATAGTAAAGGCTACAGGGGTTGTGACAGAAACAGCATGGGCAGGGGCTGCTTACAACTTGATACTTTACATGTTGGCAAGCCACGTTTTAGGAGCTTGCTGGTACCTTCTATCAATTGAGCGACAAGAAGCATGCTGGAGAAGTGTCTGCAATCTGGAGAGGTCATCTTGTGAATATGGATTCTTCGACTGCCACAGTGTTCAAGATTCTCGCAGGGTCTCCTGGTTCATAACAAGTAATGTCACAAATTTGTGCTCACCAGATCTTGACTTTTATCAGTTTGGTATGTATGGTGATGCAGTGACATCTGAAGTCACAAGCTCGGCATTCTTTAATAAATACTTCTACTGTCTATGGTGGGGCCTAAGGAATCTGAGTTCTTTGGGACAAGGTCTTCTTACTAGCACTTTTGTTGGAGAAATAATGTTCGCCATCATTGTTGCAACCCTTGGATTGGTTCTGTTTGCTTTGTCGATTGGTAATATGCAGACATATCTGCAATCAACAACTGTCCGGTTAGAAGAATGGAGGGTTAAAAGAACTGATACAGAACAATGGATGCATCACAGGCAGCTACCCCAAGAACTAAGACAATCTGTGTGGAAATATGATCAGTATAAATGGCTGGCTACACGAGGAGTGGATGAAGAGGCTCTTCTCAAAGGGCTTCCATTGGATCTTCGGAGAGACATCAAGCGCCATCTTTGCCTTGACCTTGTCCGAGGAGTTCCCTTGTTTGATCAAATGGATGAGAGGATGCTAGACGCAATATGTGAAAGGCTGAAGCCTGCATTGTGCACTGAGGGTACCTATCTAGTTCGTGAGGGTGATCCGGTAAATGAGATGCTCTTCATAATTCGAGGCCCCCTTGATTCTTACACCACCAATGGAGGCCGCACTGGATTCTTTAATTCATGCCGTATTGGACCAGGCGATTTCTGTGGTGAAGAACTCTTGACATGGGCATTGGACCCACGACCAAGTGTCATTCTTCCTTCATCCACAAGAACTGTCAAAGCCATATCTGAAGTGGAAGCCTTTGCTCTCATATCAGAAGACCTCAAATTTGTTGCATCTCAATTTAGAAGACTACACAGTAAACAACTCAGACACAAGTTCAGATTTTACTCACACCAATGGCGAACGTGGGCTGCTTGTTTCATACAAGCTGCATGGAGACGTTATAAGAAACGAAAGGAAATTGCTCAACTCAGGGCTAAGGAGAATTTCACATGTACAATTGCCGAACCTGAAACGCCAACGTATGCCGTAAGGCAGGCAAGGAGCTCTAGAAAAGGTGTGAAGATGCATCCTGGCACAGATTCTGGAGTAGTCGCCTCATTGAAGAAACCTGCGGAACCCGACTTTTCTGTTGATGAGTGA 2097 0.4297 MTFGNSRSVRFQDDLEVAKIPVANGENGMKLKYNIDGTQIPESSTNKDQKKVTGKAGKFLKAKVLTRVFSEDYERVKRKILDPRGQTIHRWNKIFLVVCLASLFVDPLFFYLPVVRDEVCINIGITLEVILTIIRTMADIFYMIQIFMRFRTAYVAPSSRVFGRGELVIDSSKIAWKYLCKGFLLDFIAALPLPQALIWFVIPNLRGSTMANTKNVLRFTIIFQYLPRLFLIFPLSSQIVKATGVVTETAWAGAAYNLILYMLASHVLGACWYLLSIERQEACWRSVCNLERSSCEYGFFDCHSVQDSRRVSWFITSNVTNLCSPDLDFYQFGMYGDAVTSEVTSSAFFNKYFYCLWWGLRNLSSLGQGLLTSTFVGEIMFAIIVATLGLVLFALSIGNMQTYLQSTTVRLEEWRVKRTDTEQWMHHRQLPQELRQSVWKYDQYKWLATRGVDEEALLKGLPLDLRRDIKRHLCLDLVRGVPLFDQMDERMLDAICERLKPALCTEGTYLVREGDPVNEMLFIIRGPLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALISEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRYKKRKEIAQLRAKENFTCTIAEPETPTYAVRQARSSRKGVKMHPGTDSGVVASLKKPAEPDFSVDE 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01272 698 Pfam Ion transport protein 91 410 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bach13g01272 698 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 68 694 - -
Bach13g01272 698 Gene3D - 92 407 - -
Bach13g01272 698 PRINTS EAG/ELK/ERG potassium channel family signature 446 453 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bach13g01272 698 PRINTS EAG/ELK/ERG potassium channel family signature 263 273 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bach13g01272 698 PRINTS EAG/ELK/ERG potassium channel family signature 378 389 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bach13g01272 698 PRINTS EAG/ELK/ERG potassium channel family signature 396 405 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bach13g01272 698 PRINTS EAG/ELK/ERG potassium channel family signature 352 369 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bach13g01272 698 PRINTS EAG/ELK/ERG potassium channel family signature 146 155 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bach13g01272 698 CDD CAP_ED 483 614 IPR000595 -
Bach13g01272 698 Gene3D Jelly Rolls 481 601 IPR014710 -
Bach13g01272 698 ProSiteProfiles cAMP/cGMP binding motif profile. 483 580 IPR000595 -
Bach13g01272 698 Gene3D Helix hairpin bin 410 474 - -
Bach13g01272 698 MobiDBLite consensus disorder prediction 664 698 - -
Bach13g01272 698 ProSiteProfiles IQ motif profile. 619 647 IPR000048 GO:0005515
Bach13g01272 698 FunFam Cyclic nucleotide-gated ion channel 1 481 599 - -
Bach13g01272 698 SUPERFAMILY cAMP-binding domain-like 413 609 IPR018490 -
Bach13g01272 698 FunFam Cyclic nucleotide-gated ion channel 1 410 474 - -
Bach13g01272 698 SUPERFAMILY Voltage-gated potassium channels 82 405 - -
Bach13g01272 698 SMART cnmp_10 483 614 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01272 Bach-Chr13 16976706 16979903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01272 57 697 Ion Channels AT2G28260 77.379 0.0 1032
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01272 K05391 - qsa:O6P43_028386 1175.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01272 13 16976706 16979903 Bach9g00204 9 1467173 1470303 BWGD
Bach13g01272 13 16976706 16979903 Bach13g01272 13 16976706 16979903 ECH