LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach13g01258	ATGGCTGAAATCGAGGGATCTCCAGGAAGCTCCATGCATGGAGTTACAGGCAGAGAGCAAACCTTCATATCCTCAGTTTCTTCCCCAATGGTTCCAACTGACACCACTGCCAAGTTTGCTCTTCCTGTTGATTCTGAGCACAAGGCCAAAGTGTTCAAACTCTTCTCCCTTGCCAAACCCCACATGAGAACCTTCCACCTATCTTGGATCTCCTTCTTCACTTGCTTTGTTTCCACTTTTGCAGCTGCTCCTCTTGTTCCCATCATTCGTGATAACCTCAACCTCACAAAATTTGACATTGGCAATGCTGGGGTTGCTTCTGTTTCAGGAAGCATCTTCTCTAGGCTTATAATGGGTGCAGTTTGTGACCTTTTAGGCCCGCGTTACGGCTGCGCCTTCCTTATCATGCTCACAGCTCCAACTGTGTTCTGTATGTCATTTGTTAAAGATGCTGCTGGTTACATAGTAATAAGGTTCTTGATTGGGTTCTCATTGGCGACCTTTGTTTCTTGCCAATACTGGATGAGCACTATGTTCAATAGCAAGATCGTAGGGCTCGCTAATGGGACTGCTGCGGGGTGGGGTAACATGGGTGGGGGAGCCACTCAGCTAATAATGCCCTTGGTGTATGAGGTGATAAGAAGAGCTGGGGCTACTCCCTTCACTGCATGGAGGATTGCTTTCTTCATCCCTGGTTGGATGCATGTCATCATGGGGATATTGGTCTTAACTCTTGGCCAAGACTTGCCTGATGGAAACCTTGGTGCCTTGCAGAAGAAGGGTGACGTTGCTAAAGACAAGTTCTCCAAGGTGTTGTGGTATGCCATAACAAATTACAGGACATGGATTTTTGTTCTCCTCTATGGCTACTCTATGGGAGTTGAATTGACCACTGACAATGTCATCGCTGAGTATTTCTTTGATAGGTTTGATCTCAAGCTTCACACTGCTGGAATCATTGCTGCTTGCTTTGGAATGGCTAACCTGGTTGCTCGTCCCTTAGGAGGGTATGCTTCTGATTTTTCAGCTCTGTTGTTTGGCATGAGAGGCAGGCTCTGGACCCTTTGGATCTTCCAAACCTTAGGAGGGGCCTTTTGCATTTGGCTTGGCCTTGCCAATTCACTTCCTATTGCCATATTGGCTATGATTCTCTTCTCTATTGGAGCTCAAGCTGCATGTGGTGCAACTTTTGGCATTATCCCATTCATTTCAAGGAGGTCTCTGGGGATTATATCAGGTCTAACTGGTGCAGGTGGCAACTTTGGTTCTGGCCTGACTCAGTTGATTTTCTTTTCAACCTCAAAATACTCAACATCTACAGGTATCTCCTTGATGGGAATCATGATTATGTGCTGCACTATTCCCGTGACTCTGGTTCACTTCCCACAGTGGGGTGGCATGTTCACTCCTCCTTCCAAAGATGTTCACAGATCTACTGAAGAATACTATTACACTTCTGAGTGGAATGAAGAAGAGAAGCAGAAGGGTTTGCACCACAGTAGTCTCAAGTTTGCAGAGAACAGCCGCTCTGAGAGAGGCAAGCGTGTGGCCTCTGCCCCAACCCCATCAAACGCAACTCCCAACCATGTCTAAGTGCCTTCTAATAAAGGAAAAGTGAAGTTTAAAATTTGAAGGTAAAATGTGCAGCTTTCAAAGCTTGCAAGTATCATCCCTAATAACGAGAAACTATGTAAATGTATGCCATGTTATTTTTTTTTTTTCTTTTAATGCTTTTTGAATTCCAGTGAAATCTACATATTCTATAGAAATAGAATATTCTGGCTTGTGCAAGTAATGGAAAATGCAGAATTATATAGTAAAGTTGTTGGCTTGTGGTATCAATACCTAAA	1850	0.4438	MAEIEGSPGSSMHGVTGREQTFISSVSSPMVPTDTTAKFALPVDSEHKAKVFKLFSLAKPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKFDIGNAGVASVSGSIFSRLIMGAVCDLLGPRYGCAFLIMLTAPTVFCMSFVKDAAGYIVIRFLIGFSLATFVSCQYWMSTMFNSKIVGLANGTAAGWGNMGGGATQLIMPLVYEVIRRAGATPFTAWRIAFFIPGWMHVIMGILVLTLGQDLPDGNLGALQKKGDVAKDKFSKVLWYAITNYRTWIFVLLYGYSMGVELTTDNVIAEYFFDRFDLKLHTAGIIAACFGMANLVARPLGGYASDFSALLFGMRGRLWTLWIFQTLGGAFCIWLGLANSLPIAILAMILFSIGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLIFFSTSKYSTSTGISLMGIMIMCCTIPVTLVHFPQWGGMFTPPSKDVHRSTEEYYYTSEWNEEEKQKGLHHSSLKFAENSRSERGKRVASAPTPSNATPNHV	530

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach13g01258	530	MobiDBLite	consensus disorder prediction	491	513	-	-
	Bach13g01258	530	SUPERFAMILY	MFS general substrate transporter	56	459	IPR036259	-
	Bach13g01258	530	FunFam	Nitrate transporter 2.1	265	466	-	-
	Bach13g01258	530	Pfam	Major Facilitator Superfamily	69	425	IPR011701	GO:0022857\|GO:0055085
	Bach13g01258	530	MobiDBLite	consensus disorder prediction	491	530	-	-
	Bach13g01258	530	Gene3D	MFS general substrate transporter like domains	57	253	IPR036259	-
	Bach13g01258	530	Gene3D	MFS general substrate transporter like domains	264	465	IPR036259	-
	Bach13g01258	530	CDD	MFS_NRT2_like	65	458	IPR044772	GO:0015112
	Bach13g01258	530	PANTHER	HIGH-AFFINITY NITRATE TRANSPORTER 2.3	1	516	IPR044772	GO:0015112
	Bach13g01258	530	FunFam	High affinity nitrate transporter	57	254	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach13g01258	Bach-Chr13	16843951	16846045	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach13g01258	1	530	Inorganic Solute Cotransporters	AT1G08090	78.113	0.0	884

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach13g01258	K02575		-	gmx:547946	986.097

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bach13g01258	13	16843951	16846045	Bach9g00221	9	1596595	1598464	BWGD
	Bach13g01258	13	16843951	16846045	Bach13g01258	13	16843951	16846045	ECH