Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01237 ATGGACCTTGGAATTGGGAATTTCGGGTGCACGCATTACAAAAGAAGATGCAAGATCAGAGCACCGTGTTGTAATGAGGTTTTTGACTGCAGGCATTGCCATAATGAAGCTAAGAACGCCGATGAAATAAATCCTCTTGATCGTCATGATATCCCACGCCATCAAGTTAAAAAGGTCATTTGCTCTTTGTGTGAAACAGAACAAGATGTTCAACAGTATTGCATAAACTGTAGAGTATGCATGGGGAAATATTTCTGTGCTACATGCAAATTCTTCGACGATGATATATCGAAGAACCAATATCATTGTGAGGAATGTGGCATATGCAGAACTGGAGGCAAGGATAACTTTTTTCACTGCAATAGATGTGGATGTTGCTACTCTAAGGTTATGAAAGATGGGCATCGTTGCGTGGAAAAAGCAATGCATCACAATTGCCCTGTTTGCTTTGAGTACCTATTTGAAACGTTGGGAGATATTACTGTTTTACCGTGCGGGCATACCATGCATTTGGACTGTGTTAGAGAGATGGAGAAACATTGTAGGTACTCATGTCCTGTTTGCTCCAAATCCTTCTGTGACATGTCTAGTTTTTGGAAGAAGCTTGACCAAGTGATTGCCTCAACTCCAATGCCTGCAACGTACAAAGATAAGCTGGTATGGATACTCTGCAATGACTGCGGAGAAAACTCTGAAGTGCAATTCCACATCGTGGCCCACAAGTGCCAAAGTTGTAATTCATACAACACCCGTCAGATACAAGGAAGTCCTGCTACCTCATGCTCTTCTAAAGTGGCTACGGTGAGATGA 810 0.4222 MDLGIGNFGCTHYKRRCKIRAPCCNEVFDCRHCHNEAKNADEINPLDRHDIPRHQVKKVICSLCETEQDVQQYCINCRVCMGKYFCATCKFFDDDISKNQYHCEECGICRTGGKDNFFHCNRCGCCYSKVMKDGHRCVEKAMHHNCPVCFEYLFETLGDITVLPCGHTMHLDCVREMEKHCRYSCPVCSKSFCDMSSFWKKLDQVIASTPMPATYKDKLVWILCNDCGENSEVQFHIVAHKCQSCNSYNTRQIQGSPATSCSSKVATVR 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01237 269 FunFam RING finger and CHY zinc finger domain-containing protein 1 217 261 - -
Bach13g01237 269 Pfam Zinc-ribbon 193 251 IPR039512 -
Bach13g01237 269 SUPERFAMILY RING/U-box 145 194 - -
Bach13g01237 269 ProSiteProfiles Zinc finger RING-type profile. 146 189 IPR001841 -
Bach13g01237 269 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 7 255 - -
Bach13g01237 269 Pfam CHY zinc finger 10 91 IPR008913 GO:0008270
Bach13g01237 269 ProSiteProfiles Zinc finger CTCHY-type profile. 81 145 IPR017921 -
Bach13g01237 269 SUPERFAMILY CHY zinc finger-like 7 80 IPR037274 GO:0008270
Bach13g01237 269 Pfam Zinc finger, C3HC4 type (RING finger) 146 188 IPR018957 GO:0046872
Bach13g01237 269 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 129 199 IPR013083 -
Bach13g01237 269 ProSiteProfiles Zinc finger CHY-type profile. 3 79 IPR008913 GO:0008270
Bach13g01237 269 SMART ring_2 146 188 IPR001841 -
Bach13g01237 269 Gene3D - 217 259 - -
Bach13g01237 269 SUPERFAMILY Zinc hairpin stack 82 139 IPR037275 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01237 Bach-Chr13 16704055 16705964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01237 8 255 C2H2 Transcription Factor Family AT3G18290 40.000 1.64e-53 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01237 K10144 - gmx:100812709 505.753