Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01228 ATGGCTAACGGTACGAATTCGGAGGAGTTTGTGGTGCTATCTCGGGTCCGGACGGGTCTGAAGAGAGAGTTTGCATTCGCCATGAAGGCTCAATCAGAGATCTGCGGATCTTTGGGTCGGACCCGGGCCAGCAGGAGCCGTAATGGGGTTCAAGAAGGTCCACGCAGCAAGAGGTCGAAGAAGTCTGATTCGATGGAGGCTGAGAGGGATGAGGAGAAAGAACAGAATCCGGTTGATGTCGTACAATTGAAGAATTCCGAGGAGGTGAAGGCCGAGGAGGTAAAGATTGAGGAGGATATGGGTGATGTAATGAGCGAGGAGGAGGCAAAAAGTGACGTGGTGGATATTGGGAGCGACGACGAACCCAAGAATCTAATGGGGGAATCAACGGGCAAGAGGGAGCCCGAGGATGAGGCAGCCATGTCCATTTGTGAAGAGGAACCCAAGAGCGACGTGGTTGAAACTGTGAGCGACGATGAGCGCAAGAATAGTCATATGTTAGAATCTTCGAAGGAGGAGGTAATGGATGAAAGGGCGCAACCCATTTGTGAAAATGAGAGCAAGGAGGAAGAAACAAATAAAACATATGTGCGTAAGTCGTTGATGAACGAGACTGTTAAGAAGGACGAGATGGAGATATGTCCTCCAAAGGACAAAGATATTAGTGGGTTAAAACCAGTTTCTGTTAACGATGATTTTAAGGTGAAGGGTTTTTCAGTTGAGAAGCCACTAAGGAGGTTTACGCGGTCGGCCCTGAAAAAGAAAGTGGATGAATCGACGGGCCAGAGAGAACCCGAGAATGAGGCAGCTATGTCCATTTGTGAAGAGGGACCCAAGAGCGATGTGGTAGAAGCTGTGAGCGATGATGAACCCAAGAGCAATCGTATGTCAGAATCTTCGGAGAAGGAGGTGGTGGATGAAATGGCGCAACCCGTTTGTGAAAATGAGAGCAAGGAGGATGAAACAGATGTGCATAAGTCGTTGATGAACGAGACCGTTAAGAAGGAAGAGATGGAGGTATATCCTCCAAAGGAAGAAGATGTTAGTGGGTTAAAACTAGTTTCTATCAACGATGATTATAAGGTGAAGGACATATCAGTTGAGAAGCCACTAAGAAGGTTTACGCGGTCGGCACTGAAACAAAAATTGGATGATATGCTGGTTAAAAACGATGGAGAAAATGCTTGTGCCAAACCAATTGTAATAAGTGATAGTGTTAAAAGAGAAGCCGAGGGTGGTCCAGTATTCACTACGCCAACTCAAATAAAAATGTCGAGGACTAGCTTGAAGAAGTTCCCTTCGAAACTGAAGGACCTTCTAGCTACAGGGATTCTTGAGGGAGTACCTGTGAAGTATGTCCGGGGCTTGAAGGCACGAAGGCCGGGAGAAACAGGGCTCCAAGGAGTGATTAGAGGCTCCGGGATTGTTTGCTATTGTGAAGTTTGTAACGGGCAGGAGGTTGTCACACCAACTGTGTTTGAGCTGCATGCTGGTAGTGCAAACAAACGCCCGCCAGAGTATATTTTTCTTGAGAATGGAAACACTCTTCGTGACATCATGAATATGTGTTTGAATCTTCCACTGGACGCCTTAGAGAATGCTATCCAAAACGCTCTTGGTGGATCCCCTATGAAGAAATCCTCCCTCTGTTTGAATTGCAGAGTGTTAATTTCTGGAGCTAGCAAGGGTTTGTCAAAAGTACTTTGTGATTCGTGCATCGAGTTAAAAGAGTCTCAACCTAGCCCCATGGTCAGTTTGGCTGCCCAAACAGCTGAGACTTATAATATCCCTGTTTCATCAGCAGCTACTCCCAGCTCTCCTGAACCAGCTTTGGTTCCAAAGTTATTGAAAAGTGGCATGAAGCACAGCACTTCTCAGGGTAAGAGCCAGGGAAGACTAACCAGGAAGGATCTACGTTTGCATAAGTTGGTCTTCGAGGAAGACGTGTTACCAGATGGAACTGAAGTTGCCTACTATGCTCGTGGACAGAAACTGTTGGTTGGCTATAAAAAGGGATTTGGAATCATTTGTAGCTGCTGCAACTCTGAGGTCAGCCCCTCACAGTTTGAAGCTCATGCTGGTTGGGCATCCAGACGCAAGCCTTACTTGCACATATATACATCCAATGGAGTCTCTCTCCATGAGTTGTCTATCTCCCTATCAAGAGGTCGGAGGTCCTCTATCATTGAAAATGATGACCTCTGCAGTATATGTTCAGATGGAGGAGATCTTTTGTGCTGTGATGGATGTCCACGGGCTTTTCACATAGATTGTGTTCCCCTGGCATGCATTCCAACTGGTACTTGGTATTGTAAATATTGTCAGAATCTGTTCCAGAAGGACAAATATGTGGAGCATAATGTCAATGCTGTGGCGGCTGGGAGGATTGCAGGTGTTGATCCTTTAGAACAGATAAACCAGAGATGCATTCGAATCGTCAAAAATCCAAAGGATCAGGGTGGATGTGCATTGTGCAGCAGAAGCCATGCATTTAGTAAGAACTTTGGTCCTGGCACAGTGATTATTTGTGATCAGTGTGAAAGAGAATATCATGTTGGGTGTTTGAAGGATCATAACATGCAGAACTTAGAGGAATTGCCTGAAGGAAACTGGTTCTGCTGTGAAGAATGCAATCAAATACATGCTACTCTTTTGAATTTGGTGGCTCATGGAGAAGCGAATCTCCCTGATGCCCTTCTAAGCATGATTAAAAAGAAGTATGAAGAAAAAGGTTTGGAAACCGGGGGTGGTTTTGATATAAAATGGAGAATTCTGAATTGGAAGTTAGCTTCTGACAATGAAACCAGGCAATTACTCTCAAAGGCTTGTTCGATTTTCCATGAGCGGTTTGATCCTATAGTTGATGCTTCTTCTGGCCGTGACTTCATTCCAACTATGCTTTATGGGAAGAACATTAGGGGTCAAGATTTTGGTGGGATGTACTGTGCAGTACTCACAGTCGACCAATTGGTGGTCTCCGCAGGAATATTTCGTATATTTGGGCAGGAAGTGGCAGAGCTTCCGTTGGTGGCAACAAATACGGATTGCCAAGGACAGGGTTACTTCCAGTCCCTGTTCTCTTGCATTGAGACGTTGCTTGGGTCTTTGAAAGTGAGGCACCTTGTCCTACCGTCTGCTGATGAAGCTGAATCAATATGGACCAATAAATTTGGCTTTGCCAACTTAGACCAAGACCAGATAGACAATTATAAGAGATATTATCACATGATGATTTTCCAAGGGACATCAGTGCTACGGAAGTCGGTTTCAGCCCTCTGAATTACTTTTCAGTTCCAGTACAAGACAAATTTTCTGTCTACTCATTAGCACTCCGTCCTTCTTGTTCTGTCTCTAGCATGTACAGAGATCTGTCCTTTTAGCGTACAGAAAAAAAATCACAATTGTGCATCCCTTCCCTTATATATCTTTTTGTAGCTCAAAGAAGCAATAGTCGAGGTTAGCATTGGAAATAGAGGAATTTTAGGACAAGGCTTCTCTTTTTGACAAGCTTGCAAAATTTTGATGTTAAATTCGTTTACCTTTGG 3545 0.4477 MANGTNSEEFVVLSRVRTGLKREFAFAMKAQSEICGSLGRTRASRSRNGVQEGPRSKRSKKSDSMEAERDEEKEQNPVDVVQLKNSEEVKAEEVKIEEDMGDVMSEEEAKSDVVDIGSDDEPKNLMGESTGKREPEDEAAMSICEEEPKSDVVETVSDDERKNSHMLESSKEEVMDERAQPICENESKEEETNKTYVRKSLMNETVKKDEMEICPPKDKDISGLKPVSVNDDFKVKGFSVEKPLRRFTRSALKKKVDESTGQREPENEAAMSICEEGPKSDVVEAVSDDEPKSNRMSESSEKEVVDEMAQPVCENESKEDETDVHKSLMNETVKKEEMEVYPPKEEDVSGLKLVSINDDYKVKDISVEKPLRRFTRSALKQKLDDMLVKNDGENACAKPIVISDSVKREAEGGPVFTTPTQIKMSRTSLKKFPSKLKDLLATGILEGVPVKYVRGLKARRPGETGLQGVIRGSGIVCYCEVCNGQEVVTPTVFELHAGSANKRPPEYIFLENGNTLRDIMNMCLNLPLDALENAIQNALGGSPMKKSSLCLNCRVLISGASKGLSKVLCDSCIELKESQPSPMVSLAAQTAETYNIPVSSAATPSSPEPALVPKLLKSGMKHSTSQGKSQGRLTRKDLRLHKLVFEEDVLPDGTEVAYYARGQKLLVGYKKGFGIICSCCNSEVSPSQFEAHAGWASRRKPYLHIYTSNGVSLHELSISLSRGRRSSIIENDDLCSICSDGGDLLCCDGCPRAFHIDCVPLACIPTGTWYCKYCQNLFQKDKYVEHNVNAVAAGRIAGVDPLEQINQRCIRIVKNPKDQGGCALCSRSHAFSKNFGPGTVIICDQCEREYHVGCLKDHNMQNLEELPEGNWFCCEECNQIHATLLNLVAHGEANLPDALLSMIKKKYEEKGLETGGGFDIKWRILNWKLASDNETRQLLSKACSIFHERFDPIVDASSGRDFIPTMLYGKNIRGQDFGGMYCAVLTVDQLVVSAGIFRIFGQEVAELPLVATNTDCQGQGYFQSLFSCIETLLGSLKVRHLVLPSADEAESIWTNKFGFANLDQDQIDNYKRYYHMMIFQGTSVLRKSVSAL 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01228 1092 MobiDBLite consensus disorder prediction 106 194 - -
Bach13g01228 1092 SMART PHD_3 821 878 IPR001965 -
Bach13g01228 1092 SMART PHD_3 734 775 IPR001965 -
Bach13g01228 1092 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 722 799 IPR013083 -
Bach13g01228 1092 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 817 880 IPR013083 -
Bach13g01228 1092 Gene3D - 919 1087 - -
Bach13g01228 1092 MobiDBLite consensus disorder prediction 281 324 - -
Bach13g01228 1092 MobiDBLite consensus disorder prediction 51 78 - -
Bach13g01228 1092 SUPERFAMILY FYVE/PHD zinc finger 726 777 IPR011011 -
Bach13g01228 1092 MobiDBLite consensus disorder prediction 35 194 - -
Bach13g01228 1092 MobiDBLite consensus disorder prediction 208 227 - -
Bach13g01228 1092 CDD PHD1_AIRE 734 774 - -
Bach13g01228 1092 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 721 798 - -
Bach13g01228 1092 ProSiteProfiles Zinc finger PHD-type profile. 732 777 IPR019787 -
Bach13g01228 1092 ProSitePatterns Zinc finger PHD-type signature. 822 877 IPR019786 -
Bach13g01228 1092 PANTHER AUTOIMMUNE REGULATOR 287 1088 - -
Bach13g01228 1092 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 975 1067 IPR016181 -
Bach13g01228 1092 SUPERFAMILY FYVE/PHD zinc finger 820 875 IPR011011 -
Bach13g01228 1092 ProSiteProfiles Zinc finger PHD-type profile. 819 880 IPR019787 -
Bach13g01228 1092 MobiDBLite consensus disorder prediction 251 324 - -
Bach13g01228 1092 ProSitePatterns Zinc finger PHD-type signature. 735 774 IPR019786 -
Bach13g01228 1092 FunFam PHD finger family protein 919 1088 - -
Bach13g01228 1092 Pfam Tify domain binding domain 468 523 IPR032308 -
Bach13g01228 1092 Pfam Tify domain binding domain 668 716 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01228 Bach-Chr13 16658370 16664220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01228 429 1089 PHD Transcription Factor Family AT2G36720 45.770 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01228 - - pcin:129313514 1231.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01228 13 16658370 16664220 Bach9g00248 9 1781740 1788342 BWGD
Bach13g01228 13 16658370 16664220 Bach13g01228 13 16658370 16664220 ECH