Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01227 CTAGGGTTTCGTTTACTCTACTTCAAAATCTAAAGCAAAACTTTACTGGGTAGGCTAGAGTTAGCAGTCATACATATAATTTGATGCTCAGAAAATTCCAAGGTTGTAACTCCCTTCACTGATGGAGCCAAGATCAATGATGATGATAACTGAACAAGCAAAGCAAATGGCAACTGTTATGGTGGTTAAATCCATGAAGATATAAACTAAATAAGTCATATGATTTTCATTTCCATGTTATCTTGTGCAAATTTTAGTGCATTTGAATAAGATGGGTTGAAAAGCTCTGTTTGTTAGTTGGAAAAGAAAAATAAAAAATGGCTATTGCTGGTCTGCACAATGTTTCTGTCCTTGATTCTACTTTCCTTAGGGACTCCCATTCTCAATCATCCAGGAGGCGAGGAGATGGTGGGAGAGGAAGCACCCGATCATCCTCACTCTTGCAAATGTGGCGAGAGATTGAAGATGAGCATGTGGTGAGTCAAACTCAAGGAAGACCTGGTGAAGGATTGCCACAACAAAGGAGTGACGGGTTGATTGATGACCTCTCACTGGGAAATATGCCAGATAGCCCTGAGAGAGAACAGAGGCATATTCTTGAAGATGCAGTTTTGGGTGAGAATGGGTTTGAAACATGGTCGCAGTCACAAAGTCAGAATGGGTCCCATGATGAACAGGAGGAATCAAACAATTCTAGTTGTGAAAACTCTTCTGAGTTTGGAGAAGTTGAAAGGGAACGAGTGAGGCAAATTTTTAGGGAATGGATGAATAGTGGCGCCGGGGATAATGCATCAAACATTTCACGAAGAAATAACAGAGGAAGGGCAGAATGGCTTGGTGAAACTGAGCAGGAGAGAGTGAGAGTCATAAGGGAGTGTGTACAAATGAGCGGCCAGCAGCGAGGTATTTCTTCTGGGGACAACAGAGAAGAACAACCTGCAGAAATTGGTAGCCACATTGAACGAATTCGTGATGGATTTGTTGTTAATCAGAATGAGGGCCAAACTGAGCATATACGGAGGGGTATTCGTAAGTTATGTGGCAGACAGGTTCTGCTAGATATGCTTAAGAAGGCTGAGAGGGAAAGGCAAAGAGAAGTTCAAGAGTTGTTGGAGCACCATGTTGTATCCAGTTTCCCCCATCGCAACCGCATTCAGGCATTGCTAAGGGGAAGGTTCTTGAGAAATGATAGATTGGTTGATTATAACAGGTCCACTTCAGTTGCAGAAAGTGAACTAGGCTTATTGAGGCAGAAACACACTGTTTCTGGTCTAAGGGAGGGATTCTTCTCTAGAAAGGATGGTTCATGTTGCAGTCAAGTAGCCAGCAACCCATCTGATATTTCATATAACAGCGATATTGATGCTAATGCAAATGAACAAGCTGATGCCAGCCGTTCACAAGTGGTCCCAACTGTATATTCTGAACAATCTGAGCCTATTAACCATGGAGGTGAAGGTGTTAGACTTGGGTCATCAGGTGGTCCAAGTTGTCTACAAGGAAGCGCAAGTGAAAATTTGGATTGGCAAAACTCAGACTCTAATGCTCATATAGAAAGAGGGCAGCAGTTACTTTGGGCAATTGAATCAAAAGATTGGCAATCATCATCCTGTGTTGACATTGAAAGAAGAGATGGCACTGGACAAAATGTGGATGAGATAACAGCAGAATATACTGATAATGTATCTGCCCAACAAAGTTTGCATACTGAAGATGGAGCTCATAGCAATATGCAAGATTTCACTGAGGTACATCATGAAGAATCTGAGCTAGGTGATATTAGTAATGATGATCACAATTTATCAAATCATAGCAATCATATGGTTGATGATGTAAATTGGAATGGTTCTGCTGCTCTAGAAGTGGAGCTGCAGGGTGAAGTTATTGAAAATGAAGGAAATGATTGGCAACAAACTAATGTTGAATGGAGAAACAGAACTATTGAAGGCATGGATGGCAATCAGCACAGTGAATGGCCCCAAGAATTCTTGGGAAACGAGGGTGAGGAAAACTCTCATATGCAAGAAGTCCCTGAAATGTGGCAAGAAGATGGTGGCTTTCAGGAGGCTGTGGAGAATTGGTTGGGAGAACCTTCTGATCATGAAGGTGCTCCAGTTGGTAGAATTGATGGATTTTATTTTCCTGATGATGATAATGTGTACAGTGTGGAACTCAGGGAACTGCTAAATAGGAGAAGTGTCTCTAACCTCCTTGGCAGCAGTTTTCGTGAGAGTCTTGACCAGTTGATACAATCATATGTTGAAAGGCAAGGTCATGCTCATGTTGAGTGGGAGCTGCAAGAAACAACTTCTGCTGCCTCAGTAGAGCAGGAATTGGAGCAGCAGAGTAGGGATCGGATCATTGCTCAAGGGGAAGCTGTTAACAATCCCTTAGATATACCCCCGCCACCAACACCTCCTTCTCATGCTCTTTGGGAACGGCAATCACGTCATGACAACTGGACACAGAATGATGTGAATAATCCACGTCTTGGAATTGAATGGGAGATAATTAATGATTTGAGGATTGACATGGCTAGGCTACAGCAGAGGATGAACAATATGCAGAGGATGCTTGAGGCCTGTATGGATATGCAGCTTGAGTTGCAGCGCTCAATAAGACAAGAAGTTTCTGCTGCTCTAAATCGTTCAACTGGTTCATCAGGAATGCATGACTATGAATCACCGGATGATAAATCTAAATGGGAATGTGTGAGGAAAGGGCTTTGCTGTATGTGCTGTGAAAGTAATATCGATTCCTTGCTGTACAGATGTGGTCACATGTGCACATGTTCAAAATGTGCGAATGAGTTGTTCCAAAGTAGAAGAAAGTGCCCAATGTGTCAAGCACCTGTGGTGGAGGTGATCCGTGCTTATTCTATACTATAA 2888 0.4249 MAIAGLHNVSVLDSTFLRDSHSQSSRRRGDGGRGSTRSSSLLQMWREIEDEHVVSQTQGRPGEGLPQQRSDGLIDDLSLGNMPDSPEREQRHILEDAVLGENGFETWSQSQSQNGSHDEQEESNNSSCENSSEFGEVERERVRQIFREWMNSGAGDNASNISRRNNRGRAEWLGETEQERVRVIRECVQMSGQQRGISSGDNREEQPAEIGSHIERIRDGFVVNQNEGQTEHIRRGIRKLCGRQVLLDMLKKAERERQREVQELLEHHVVSSFPHRNRIQALLRGRFLRNDRLVDYNRSTSVAESELGLLRQKHTVSGLREGFFSRKDGSCCSQVASNPSDISYNSDIDANANEQADASRSQVVPTVYSEQSEPINHGGEGVRLGSSGGPSCLQGSASENLDWQNSDSNAHIERGQQLLWAIESKDWQSSSCVDIERRDGTGQNVDEITAEYTDNVSAQQSLHTEDGAHSNMQDFTEVHHEESELGDISNDDHNLSNHSNHMVDDVNWNGSAALEVELQGEVIENEGNDWQQTNVEWRNRTIEGMDGNQHSEWPQEFLGNEGEENSHMQEVPEMWQEDGGFQEAVENWLGEPSDHEGAPVGRIDGFYFPDDDNVYSVELRELLNRRSVSNLLGSSFRESLDQLIQSYVERQGHAHVEWELQETTSAASVEQELEQQSRDRIIAQGEAVNNPLDIPPPPTPPSHALWERQSRHDNWTQNDVNNPRLGIEWEIINDLRIDMARLQQRMNNMQRMLEACMDMQLELQRSIRQEVSAALNRSTGSSGMHDYESPDDKSKWECVRKGLCCMCCESNIDSLLYRCGHMCTCSKCANELFQSRRKCPMCQAPVVEVIRAYSIL 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01227 856 Coils Coil 732 759 - -
Bach13g01227 856 SUPERFAMILY RING/U-box 803 849 - -
Bach13g01227 856 MobiDBLite consensus disorder prediction 107 132 - -
Bach13g01227 856 CDD mRING-HC-C3HC5_NEU1 804 853 - -
Bach13g01227 856 MobiDBLite consensus disorder prediction 370 393 - -
Bach13g01227 856 MobiDBLite consensus disorder prediction 107 136 - -
Bach13g01227 856 MobiDBLite consensus disorder prediction 18 39 - -
Bach13g01227 856 Coils Coil 243 263 - -
Bach13g01227 856 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 443 856 - -
Bach13g01227 856 MobiDBLite consensus disorder prediction 53 88 - -
Bach13g01227 856 Pfam Zinc finger, C3HC4 type (RING finger) 801 848 - -
Bach13g01227 856 ProSiteProfiles Zinc finger RING-type profile. 804 843 IPR001841 -
Bach13g01227 856 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 783 854 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01227 Bach-Chr13 16643850 16648278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01227 804 850 C3H Transcription Factor Family AT3G06140 38.298 7.59e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01227 - - gmx:100804184 1119.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01227 13 16643850 16648278 Bach9g00250 9 1801203 1804914 BWGD
Bach13g01227 13 16643850 16648278 Bach13g01227 13 16643850 16648278 ECH