Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01226 ATGGGACTCTACAATCGGAGACTACTGCTAGTCGACGATATACCCGCCTCCACCGTATCTCCTCCCCCTCTCATAGAAACCACTACAACCAATAACGCATCCTCGCCACCACAATCAATGCCCACATCATCGTCAACACCACCATCAAGTTTGCCGCCACGTCCAGTATTGGATGCCAACATTGCTTATACCATGCTTGTCCTCCTCACCGCCCTCTTCTTCTTGGGTTTCATCTCTAACTACATACGTCGCTTCAGCGAGGACTCCACCACCCTAGTCTCATCCCAAAGTCGCCGTCGCCGCCGCCGCCCATCGTCTCCCTTGTCTAGGAATCATTATTCCACGTCATCGTGCTGCGGAGGTGTCGATCCCGCCACCATAAAATCCCTGCCGGTGTTTGAGTACCACAGTGACGTTAAGCAACAGCAGCAGCTGCTTGAACTTGACTGTGCGATTTGTCTAAGCGAGTTTCAAGAGGGTGAAGCCCTGAAGGTGATTCCATACTGTAAGCACGTGTTTCATCCCGAATGTATAGATAAGTGGCTCGCTTCGCACGTGACGTGTCCGGTTTGCCGGTCAACCATGTTTCTTCAAATGAAAGGACATGATGACGGAGGCTCAGGTACCGTAGACAAGAGAGGACATGAGGGTCAGGGTGTGAGTGTGAGTAGCGATCAACAAGGATCGACGGTCGAGAATTGTGTAACGTGGAAACATGGCGATGTAGGGTCATACACTGAGCCCAGGACTGGTAGTTGTTCCAACTCAAAGGGCGGTGTACTGATGTTGCGAAGGACAATGAGTATCTGA 810 0.5136 MGLYNRRLLLVDDIPASTVSPPPLIETTTTNNASSPPQSMPTSSSTPPSSLPPRPVLDANIAYTMLVLLTALFFLGFISNYIRRFSEDSTTLVSSQSRRRRRRPSSPLSRNHYSTSSCCGGVDPATIKSLPVFEYHSDVKQQQQLLELDCAICLSEFQEGEALKVIPYCKHVFHPECIDKWLASHVTCPVCRSTMFLQMKGHDDGGSGTVDKRGHEGQGVSVSSDQQGSTVENCVTWKHGDVGSYTEPRTGSCSNSKGGVLMLRRTMSI 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01226 269 ProSiteProfiles Zinc finger RING-type profile. 150 192 IPR001841 -
Bach13g01226 269 MobiDBLite consensus disorder prediction 21 40 - -
Bach13g01226 269 MobiDBLite consensus disorder prediction 202 228 - -
Bach13g01226 269 CDD RING-H2_EL5-like 149 192 - -
Bach13g01226 269 PANTHER RING FINGER DOMAIN-CONTAINING 38 195 - -
Bach13g01226 269 SMART ring_2 150 191 IPR001841 -
Bach13g01226 269 SUPERFAMILY RING/U-box 127 200 - -
Bach13g01226 269 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 122 198 IPR013083 -
Bach13g01226 269 MobiDBLite consensus disorder prediction 20 52 - -
Bach13g01226 269 MobiDBLite consensus disorder prediction 92 117 - -
Bach13g01226 269 FunFam E3 ubiquitin-protein ligase ATL6 110 198 - -
Bach13g01226 269 Pfam Ring finger domain 149 192 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01226 Bach-Chr13 16640364 16641173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01226 57 200 C3H Transcription Factor Family AT2G27940 45.033 9.22e-36 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01226 - K10664 qsa:O6P43_000398 186.422