Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01218 ATGGCGGAGGACCGGAACGGCGATAGGAATGAGGGCAGCGATTATACGTCAGAGGACGAAGGAACTGAGGATTATAGGCGAGGAGGATACCATGCTGTTCGAATTGGCGATACTTTCAAAAATGGGTGTTATGTGATACAGAGCAAGCTTGGATGGGGTCATTTTTCCACAGTGTGGCTCGCTTGGGATACTCAGAGATCGCGTTATGTAGCTCTAAAAATTCAGAAGAGTGCTCAGCACTACACAGAAGCTGCAATGGATGAAATAAAGATTCTCAAACAGATTGCTGAGGGTGACGCAGATGACAAGAAGTGTGTCGTAAAGCTCTTGGATCACTTTAAGCATTCAGGGCCTAATGGGCAGCATGTGTGTATGGTTTTTGAATTTTTGGGTGACAATCTTCTGACCCTTATCAAGTACAGTGATTACCAAGGGGTTCCTCTCTCCATGGTTAAAGAGATTTGTTTCCATATTTTGGTGGGTTTGGATTACTTGCATCATGAGCTTTCTATAATACACACAGATTTGAAGCCAGAGAATGTCTTGCTCCTGTCAATGATTGATCCCTCTAAGGATCCAAGAAAATCTGGAGCTTCACTTATCCTCCCGAACACTAGGAATAATACTTCGACCACAAAGGACCAAAAAAGTTTGAATGGAGATCTGACTAAGAACCAGAAAAAGAAAATGCGAAAAAAGGCTAAGAAGGCAGCTCAATGTGGTGCTGGGAAGGAAACTCCTGAGGAAACCGAGGAGGATTCTAAAGCAACTGACCAAGAAGATTGTAGTAATGGTACGAAATCAACTGGGATATCTGCTGAAGATCAACCTTATACTCCTGTGAGTAAAGATCAATCAGCAAAGACTGATAGTCCTGTGAGTAGAGATGAGTCAACTAAGGTTGTTGAAGTTAAGGATTTTCCTGAAGGAAGTCATGGTCATAGGAGACCTAGCCGTTCCACAAGGAAGAAGTTGCTTGCAGCTGTTGATCTTAATTGCAAGCTGGTTGATTTTGGAAATGCTTGTTGGACTTATAAACAATTCACAAATGATATTCAGACAAGGCAGTATAGGTGCCCTGAGGTTATTCTTGGATCAAAATACTCAACTTCAGCAGATCTATGGTCCTTTGCTTGCATTTGCTTTGAGCTTGCCACTGGTGATGTTCTTTTTGATCCTCACAGTGGTGACAACTATGATAGGGATGAGGATCATCTGGCATTAATGATGGAACTTCTTGGAATGATGCCTCGCAAGATTGCACTAGGTGGCCGCTATTCCCGGGAAGTTTTCAATAGATGTGGTGATTTGAGGCACATCCGCCGGTTGCGATTCTGGCCTCTTACTAAGGTGTTGATGGAGAAGTATGATTTCAGTGAGCAAGATGCGAATGACATGGCTGACTTCCTTATTCCGTTATTTGATTTTGTCCCTGAAAAGAGGCCAACAGCTGCACAGTGTCTTAATCATCCATGGATAAGTGGAGGTCCTCGGGTTCTTGAGCCTTCCTTGACTACAGTGCAACCTGAGGCTACAGACGGGGGAGTGTCTGAAAAGATGAAGGAAAGGGCTGAGCAGGAGGCAGTGGAAGTTGGTGTGGGGAATATGGCCATTGATGCAACTCCCAAGCCAGTAAAAGAGTCCCAACCTATAAAGTCATAAAGACTTTATAGGTGGTATATTCACTCTCTTTCGTTTTCATGCACGAGTTTTGCCGGTCCATGGCGTGCAATATTCTCTGAATCGTAGTGTTGGTCTTCATATCTGGAGGTCGTGATTTGGGAAGTCGTTCATAGTGAATGCAGCTGGATGTACACTCCAATGCTGGAGTCTCACCGCTTTCATGGTTACCAGGATCATAGAATGTTTAGAATATAGCTTCCTGCAATGCTATGTTGTACAATTTATGTTTTTTTTTTTTTTTTGGAGAATTTGTTTGAAACTTCTCCCTAGATTAGATTTTTTTTTCTTTGAAATTGATACATTTGAGGGGTTTGAATTGTATATTTGAACGAGTTTATTTCCAATCTATCATTTTTTC 2041 0.4238 MAEDRNGDRNEGSDYTSEDEGTEDYRRGGYHAVRIGDTFKNGCYVIQSKLGWGHFSTVWLAWDTQRSRYVALKIQKSAQHYTEAAMDEIKILKQIAEGDADDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYQGVPLSMVKEICFHILVGLDYLHHELSIIHTDLKPENVLLLSMIDPSKDPRKSGASLILPNTRNNTSTTKDQKSLNGDLTKNQKKKMRKKAKKAAQCGAGKETPEETEEDSKATDQEDCSNGTKSTGISAEDQPYTPVSKDQSAKTDSPVSRDESTKVVEVKDFPEGSHGHRRPSRSTRKKLLAAVDLNCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIALGGRYSREVFNRCGDLRHIRRLRFWPLTKVLMEKYDFSEQDANDMADFLIPLFDFVPEKRPTAAQCLNHPWISGGPRVLEPSLTTVQPEATDGGVSEKMKERAEQEAVEVGVGNMAIDATPKPVKESQPIKS 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01218 553 FunFam CMGC/SRPK protein kinase 30 129 - -
Bach13g01218 553 MobiDBLite consensus disorder prediction 200 219 - -
Bach13g01218 553 SMART serkin_6 44 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g01218 553 MobiDBLite consensus disorder prediction 1 23 - -
Bach13g01218 553 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Bach13g01218 553 ProSiteProfiles Protein kinase domain profile. 44 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g01218 553 Gene3D Phosphorylase Kinase; domain 1 20 126 - -
Bach13g01218 553 FunFam Serine/threonine-protein kinase SRPK-like protein 323 493 - -
Bach13g01218 553 CDD STKc_SRPK 33 493 - -
Bach13g01218 553 MobiDBLite consensus disorder prediction 261 288 - -
Bach13g01218 553 MobiDBLite consensus disorder prediction 193 321 - -
Bach13g01218 553 SUPERFAMILY Protein kinase-like (PK-like) 39 506 IPR011009 -
Bach13g01218 553 MobiDBLite consensus disorder prediction 533 553 - -
Bach13g01218 553 Pfam Protein kinase domain 330 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g01218 553 Pfam Protein kinase domain 44 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g01218 553 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Bach13g01218 553 Gene3D Transferase(Phosphotransferase) domain 1 127 494 - -
Bach13g01218 553 MobiDBLite consensus disorder prediction 289 315 - -
Bach13g01218 553 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 14 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01218 Bach-Chr13 16584389 16588045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01218 1 543 EF-hand Containing Proteins AT5G22840 66.667 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Bach13g01218 Pkinase 2.5e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01218 K08832 - gmx:100791829 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01218 13 16584389 16588045 Bach9g00263 9 1902190 1905299 BWGD
Bach13g01218 13 16584389 16588045 Bach13g01218 13 16584389 16588045 ECH