Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01211 ATGGAGCCCCCAGTTGTCAGATCGAGGGGTCGGCCAAGGAAACGGAGGAGAAAAGAAGATGAAAGTGGGACTGATGATAAAAGATCGGGCCCTGAAATGAAAAAGCAGGTAGTTGAGACAAGGCCAATAGCGTTGATTGGGCGATATGTACTGAAAGAGTTCAACCGAAGTGGGATTTTTCTTGGGAAAGTTGTAGGTTATGATTGTGGATTATATAGAGTCCATTACGAGGATGGAGATTATGAGGATTTGGATAGCAGTGAAATTCGCGGAATACTTCTTAATGACCATTATTTTGATGATGATTTGATTCAGAGGAGGAGTAGATTAGATGATGGTGTCAATATCAAAAAGAAGAAGGAGATGAGTTCTGTTGATCCAAATAATGGTGTCTCAAGTGAATTGCATGGTGAGTTGTCAATTGAAAAGGTGGTGCAAGTTGAAGGGGATGCTGATTCATCAAGTGATTCGAGTGCGTGTTCAAAGGAAAGGGATTCTGGGTCTGATGCGGACTCACCGCCTCCACCACCATTACAATTGCCGCCATCTTCAGGGACTATTGGTGTCCCTGAGCAGTATGTCTCGCATCTTTTTTCAGTTTATGGATTCTTGCGATCATTCAGCATTCGTTTGTTTATAAGTCCGTTTTCTTTGGATGATTTTGTCGGTTCACTTAATTGCCGGGTTTCAAACACGTTGTTTGATGCCATTCATGTTTCTGTGATGCGTGCGTTGAGGCGTCATCTTGAAATGCTGTCATCTGAGGGCTCAGAGCGTGCGTCAAAGTGCCTAAGGTGCAATGATTGGAGCTTGCTAGATATATTGACTTGGCCAGTTTTTGTGATTCAGTATTTAGTAGTTCATGGATATACAAAGGGACCCGAGTGGAAAGGATTTTACGAAGAGATTTTTAATGGTGAATATTATTTGTTACCCGTAAGTAGGAAGTTAATGATATTGCAAATTCTCTGTGATGACGTCTTGGAGTCTGAGGAGCTAGAAGCTGAAATGAATATGCGGGAGGAATCAGAGGTTGGGATGGATTATGATGCAGAAGATATCCTTCCTGTGGATAATCTTCCAAGAAGAGTTCATCCCAGATATACCAAAACTTCTGCTTACAATAAAGATTCCATTAAGTTTATTCCAGAATCAAATCCTGTGAAGCTACCTGGTAACTCAGTTTTGGATTGCAGAAATAGTGAAAGGAATGAGGCTGCTGATGTTGACATAAATGGGGATGAATGTCGCCTCTGTGGTATGGATGGGACCTTGCTTTGTTGTGATGGATGTCCTTCTGCATATCATTCGAGGTGTATTGGTGTGATGAAAACGTTTATACCAGAAGGTCCATGGTATTGTCCAGAGTGCAAAATTAGTATGACAGGGCCAACAATTACGAAGGGAACATCACTTAGAGGGGCTGAAATATTTGGAATAGATTTGTATGGACAAGTCTTCATGGGTACTTGCGCCCATTTGATAGTGTCCAATATCAATGGGGAATTTTGTCTCAGATATTACAATCAGAATGATATTCCTAATGTTTTCCAAGTCCTACATGCATCCTTGGAGCATAGACCTTTATATTATGGCATTTGCAAGGCAGTTTTACAATATTGGAATTTTGCAGAAAGTGTCTTGCCTCTACCTGTTACAACTGGAACAAATTTAAACTCAGTGAATACAGAAGAGGATGCAAAGTTCTCTAGTTTAGTACTTCCTTTTTTGGGTGAAGAAGAGTGTAAAGACGCTAATTTGGTGAAGGCAAAATACAGCTTAAGTACTGTGAGTGAGATTCATAGTAACAATGTGGTGCCTTCTCTTGATGCCTCATTTCCTACCACTGAAAGAAAGATTACTGCTCCTGAAAGCTGTAGCAACACTAAAATTGAGGAGTTCCCTATGATGAATACTAAGCATCCTGAGGAAACTATGACACAGTCTGTTATCCCAGCTGGTTCTGTTAGCTATCAGGGTGAAGTTTCTAGCATGAACTACCAGAGTTGTCTTGATAGATTGAGTGCAGCAGATCCTGCCATGTGCACCTTGCTAAACAGCCGTTATGGTTATTGTCAGTATGCAAAAGACATGAGATTGCCTACGAATTTGTCCTCACAAATCAAAGAAGGCAACCGTGCTGGTTCTGGAAAAAGTGAACACAATTTAACTTGTGATTTTGTATACGTGGGTTCCTCCTATAAACCTCAGGCGTACATTAATTACTATATGCATGGTGATTTTGCTGCATCTGCTGCTGCTAAATTGGCTGTTCTTTCTTCAGAGGATTCAAGGTCAGATGGTCATGTGTCAGAGAATCTTAAGAAATCTTTATTGGGAAACACTTATTTGCAAGCAAAAGCGTTCTCACTAACAGCTTCACGTTTCTTTTGGCCAAGTTCTGAAAAGAAGTTTGTGGAGGTTCCAAGAGAGAGGTGTGGCTGGTGTCTTTCTTGTAAAGCACCTGTTTCAAGCAAGAGAGGATGCATGTTAAATCATGCTGCCATAAGTGCCACCAAAAGTGCTACAAAAATCCTTGCTGGTCTTTGTCCTGTAAGGAGTGGAGAGGGAATACTTCCTAGCATTGCAACATACATTATATATATGGAAGAAAGCTTACGTGGTTTAGTAGTTGGGCCTTTTGAAAGTGCAAGCTACAGAAAGCAGTGGCGCAAACGAGTGGAACAGGCCTCAACATTCAAGGCTATAAAGCCCCTTTTGATTGAACTTGAGGAGAACATTCGCACAATTACTTTTACTGGGGACTGGGTCAAGCTGATGGATGATTGGTTGGTTGAATCTTCAATGTTTCAAAGTCTTGCATGTGCTGTTGGAACAACACAAAAACGCTTACCTGGAAGGCGTAGTAAGAAACAGTTAGCTATTGATGAAGTTGCAGCTGATGGTTGCAATGAGAACAACTTTGCCTGGTGGCATGGTGGGAAATTCACTAAGTTTATATTTCAGAAAGTCGTTTTGCCAAAATCCATGGTCAGAAAAGCAGCTCGCCAAGGTGGGCGGACCAAAATTTTTGGAGTTTTCTATGCTGATGGCTCTGAAATTCCTAAAAGAAGCAGACAGCTAGTTTGGAGAGCTACAGTACAAATGAGTAGGAATGCATCACAACTTGCTCTTCAGGTCAGATACTTAGATTTTCATCTTAGATGGAATGATCTGATTCGTCCTGAGCAGAACCTTCAGGATGGGAAAGGTCAAGAGACGGAAGCTTCTGCTTTTAGAAATGCAAATATTTGTGATAAAAAAGTTGTTGAGGGAAAAAATTTATATGGAATTGTTTTTGGGTTCCAAAGGCATCTTCCTTCTCGTGTTATGAAAAATATTATTGAAATAGAGCAAGGTCCAGACGGAAGGGAAAAATATTGGTTTTCTGAAGCACGCATTCCTCTATATTTGGTTAAAGAGTATGAAGAAGATATAAATAAAGTGCCATTCGATAAAGGGCACTTGAATTTCGCATCTCAGTTGAACCAAAAGCGGTTGAAAGCTCCCTGCAAGGATATATTTTTTTATCTTGCCTGCAAGAGAGACAAATTGGACATGTCATCATGTTCTGTATGTCAGCTTGGCGTTTTAGTTGGGAATGCTTTTAAGTGCGGTGCATGTCAAGGTTATTGTCATGAAAGCTGTTCTGTAAGTTCAAGAATCTCTGCAAATCAGGAAGCGAAGTTCTTGTCCACATGCAAGCAATGTTATAATGCCAAATTACTTACTCAAAAAGTGACCAGTAATGAATCTCCAACAAGTCCCTTGCTCTTGCAACAACGAGAACATGGCTCAACAACAGTTTTGAAGGGACCAAGGCCGAAATGTTATGATCAAACATTGACATCTACCAGGACAAAGGATACTCGTCCTGACATGAAACAAGGTGCTTCTGACTCTGCTGTGGCCAAAAAACCACAACGGAGAAATTGTTCTTGGGGTCTTATATGGAAAAAGAAGAACAATGATTATTCAGGCATAGAATTTCGGCTTAAAAACATACTTTTGAAGGGAGGTTCCAGTGTGCCTCAATTGGAACCTGTTTGTCACTTGTGCCGTAAGCCTTATAGGCCTGATTTGATGTATATTTGCTGTGAGACATGCAAAAATTGGTATCATGCTGAAGCTGTTGAGCTTGAGGAGTCAAAAATTTCGGATGTGTTGGGCTTCAAGTGTTGCAAGTGTCGCAGGATAAAATCACCTGTGTGTCCTTACTCTGATTTGAAGAATAAAATGAAAGAGGGAAAGAAGACACAGTCGAAGTCTTTAAAGAACGAGCATTCTGGAGCAGATTCTGATTCTGGAACTCTTTCTGAACTGAAAGAGTGTGAGCCTACTACTCCAGTCTTTCCTTTGGAGGATACATCTAGACTAGATAATGACCCTCTGCTTTTCTCGCTTTCAAGAGTTGAGCTGATAACAGAACCTATTGCAAAAGCCGATGTTGAGTTGAATGCTGCTTCTGTGCCAGGGCCTCAGAAACTACCAGTGAGAAGGCACGTTAAGCGTGAGGGGGATGGTGATGGTTCCTGTGGAAGTAAATTTACTCGTGCTGAATTTTCAACACACTATGAAACAGGTAATCTGTCCGAACAAGCTGAGAAGGCATCATCCCCTTTTGTAGAATTTGACTCTACTGTGCAACTAGACAGCAACGATCCGCTGAACGACTGTGAAAGTGTAAATTACGATTGCATGGAGTTTGAACCCCACACCTACTTCTCTCTGACTGAATTGCTGCTCCCAGATGATAGCAGTCAGTTTGAGGGGGCTGATGTTTCTGGGGATTTGTCAGAATATTTGGGAAATTCTTCTACACAAGCAGGAGTTCCTGAAGAATGCGAAACAGTTAGTTTAATAGATAACTCTGAACCTACAACCTCTTTTCAAGGCAGTGCTTATAAATGTCGGCAATGTTCACAGATGGAGCCACCGCCTGATCTCTCTTGTGAGATTTGTGGGCTTAGGATTCACAGCCAATGTTCACCTTGGCTTGAATCACCATCTCGGTTAGGAAGCTGGAAATGTGGAAATTGCCGGGAATGGCGATAACCAAATAGCTATCATCTTGTCAAGCTTTTCTTGCGCGGTTGAATTTTGGGGAGAGGTGGTTCTTGGTTGAGCCTTGATGGGGCCTGTTTTGC 5147 0.4142 MEPPVVRSRGRPRKRRRKEDESGTDDKRSGPEMKKQVVETRPIALIGRYVLKEFNRSGIFLGKVVGYDCGLYRVHYEDGDYEDLDSSEIRGILLNDHYFDDDLIQRRSRLDDGVNIKKKKEMSSVDPNNGVSSELHGELSIEKVVQVEGDADSSSDSSACSKERDSGSDADSPPPPPLQLPPSSGTIGVPEQYVSHLFSVYGFLRSFSIRLFISPFSLDDFVGSLNCRVSNTLFDAIHVSVMRALRRHLEMLSSEGSERASKCLRCNDWSLLDILTWPVFVIQYLVVHGYTKGPEWKGFYEEIFNGEYYLLPVSRKLMILQILCDDVLESEELEAEMNMREESEVGMDYDAEDILPVDNLPRRVHPRYTKTSAYNKDSIKFIPESNPVKLPGNSVLDCRNSERNEAADVDINGDECRLCGMDGTLLCCDGCPSAYHSRCIGVMKTFIPEGPWYCPECKISMTGPTITKGTSLRGAEIFGIDLYGQVFMGTCAHLIVSNINGEFCLRYYNQNDIPNVFQVLHASLEHRPLYYGICKAVLQYWNFAESVLPLPVTTGTNLNSVNTEEDAKFSSLVLPFLGEEECKDANLVKAKYSLSTVSEIHSNNVVPSLDASFPTTERKITAPESCSNTKIEEFPMMNTKHPEETMTQSVIPAGSVSYQGEVSSMNYQSCLDRLSAADPAMCTLLNSRYGYCQYAKDMRLPTNLSSQIKEGNRAGSGKSEHNLTCDFVYVGSSYKPQAYINYYMHGDFAASAAAKLAVLSSEDSRSDGHVSENLKKSLLGNTYLQAKAFSLTASRFFWPSSEKKFVEVPRERCGWCLSCKAPVSSKRGCMLNHAAISATKSATKILAGLCPVRSGEGILPSIATYIIYMEESLRGLVVGPFESASYRKQWRKRVEQASTFKAIKPLLIELEENIRTITFTGDWVKLMDDWLVESSMFQSLACAVGTTQKRLPGRRSKKQLAIDEVAADGCNENNFAWWHGGKFTKFIFQKVVLPKSMVRKAARQGGRTKIFGVFYADGSEIPKRSRQLVWRATVQMSRNASQLALQVRYLDFHLRWNDLIRPEQNLQDGKGQETEASAFRNANICDKKVVEGKNLYGIVFGFQRHLPSRVMKNIIEIEQGPDGREKYWFSEARIPLYLVKEYEEDINKVPFDKGHLNFASQLNQKRLKAPCKDIFFYLACKRDKLDMSSCSVCQLGVLVGNAFKCGACQGYCHESCSVSSRISANQEAKFLSTCKQCYNAKLLTQKVTSNESPTSPLLLQQREHGSTTVLKGPRPKCYDQTLTSTRTKDTRPDMKQGASDSAVAKKPQRRNCSWGLIWKKKNNDYSGIEFRLKNILLKGGSSVPQLEPVCHLCRKPYRPDLMYICCETCKNWYHAEAVELEESKISDVLGFKCCKCRRIKSPVCPYSDLKNKMKEGKKTQSKSLKNEHSGADSDSGTLSELKECEPTTPVFPLEDTSRLDNDPLLFSLSRVELITEPIAKADVELNAASVPGPQKLPVRRHVKREGDGDGSCGSKFTRAEFSTHYETGNLSEQAEKASSPFVEFDSTVQLDSNDPLNDCESVNYDCMEFEPHTYFSLTELLLPDDSSQFEGADVSGDLSEYLGNSSTQAGVPEECETVSLIDNSEPTTSFQGSAYKCRQCSQMEPPPDLSCEICGLRIHSQCSPWLESPSRLGSWKCGNCREWR 1684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01211 1684 MobiDBLite consensus disorder prediction 15 35 - -
Bach13g01211 1684 MobiDBLite consensus disorder prediction 1282 1302 - -
Bach13g01211 1684 MobiDBLite consensus disorder prediction 1415 1440 - -
Bach13g01211 1684 CDD Tudor_AtPTM-like 46 94 IPR047365 -
Bach13g01211 1684 ProSiteProfiles DDT domain profile. 191 251 IPR018501 -
Bach13g01211 1684 SUPERFAMILY FYVE/PHD zinc finger 1346 1403 IPR011011 -
Bach13g01211 1684 SUPERFAMILY FYVE/PHD zinc finger 403 464 IPR011011 -
Bach13g01211 1684 ProSitePatterns Zinc finger PHD-type signature. 416 457 IPR019786 -
Bach13g01211 1684 PANTHER PHD FINGER FAMILY PROTEIN 39 1648 - -
Bach13g01211 1684 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 407 462 IPR013083 -
Bach13g01211 1684 MobiDBLite consensus disorder prediction 149 185 - -
Bach13g01211 1684 Pfam DDT domain 193 248 IPR018501 -
Bach13g01211 1684 SMART testlast3 191 251 IPR018501 -
Bach13g01211 1684 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1339 1415 IPR013083 -
Bach13g01211 1684 MobiDBLite consensus disorder prediction 1415 1429 - -
Bach13g01211 1684 MobiDBLite consensus disorder prediction 1 36 - -
Bach13g01211 1684 Pfam PHD-finger 416 458 IPR019787 -
Bach13g01211 1684 SMART PHD_3 1189 1238 IPR001965 -
Bach13g01211 1684 SMART PHD_3 1349 1397 IPR001965 -
Bach13g01211 1684 SMART PHD_3 415 458 IPR001965 -
Bach13g01211 1684 SMART PHD_3 1636 1681 IPR001965 -
Bach13g01211 1684 ProSiteProfiles Zinc finger PHD-type profile. 413 460 IPR019787 -
Bach13g01211 1684 CDD PHD2_CHD_II 416 457 - -
Bach13g01211 1684 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 296 338 IPR028942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01211 Bach-Chr13 16523999 16530639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01211 281 575 EF-hand Containing Proteins AT5G22760 45.752 4.79e-75 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Bach13g01211 DDT 9.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01211 - - lang:109351702 2076.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01211 13 16523999 16530639 Bach9g00272 9 1958155 1964756 BWGD
Bach13g01211 13 16523999 16530639 Bach13g01211 13 16523999 16530639 ECH