Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01210 ATGAAAACGTACGTAGCTAAGGTTGGAAAACCGCCTCTGGAGACGATTACTGTGCTGCTTGGTGTAGAGGAGCAGAGAAGAAGGTCAAGGAAGAGAGATAACCCTAGAAGAGATAACAGAGAGAACAAAGGCCATTTCATATCCTGCTGCCGAGTTAAATTATCATCAGAACGAGTCTCATGGTGTTTGACTCAACTCACTCAACTCTCCGTATCCGAGTTGTCACACCGCCCGTCCGAGTCAATGTTCACCCGGGTAGGGTTAGGGCTCTGTAAAATGGGGAACAAGGTATCAGACGGATTATTGTCCACCATTCGATCCTTTGTTGGTTCGGAATATACTGATATGGACATCATCAGAGCCCTACACATGGCCAACAACGACGCCACAGCCGCCATTAACATCATATTTGATACCCCCAATTTCAAATTCAAAGAGAGATTAGGCGCTAAGACAAATCCCCACGTTTCTCAGCGAAGTTGCCCGGATACTGCAACTGGTTCCAAGAAGTCCGAGCAGCGAAGATCGAGCTCTAATACAGCAACTGTTATCAGGAAATCAGAACAAAATGGTAAAGAGGACATTGATTGCTCTGGGTCGGAGGCAGATGCTGCTGACTGCATTATTAACTCAGATGCTGCTGCTATGGGTGAAGTGAGAGGGCGTTCGAATTTTGCGGGAAGTGATTGGTGGTATGTCGGTTGTGGTGACCTGGCTGGATTGTCAACCTGCAAAGGGAGGACTATCAAGCCTGGTGATGAAGTTTTTTTCAAGTTTCCGTTCAAGACAGTTGTTGCTTCACCATCCCGGGGAAAGGGATTTGGACGGGGGCGACAGTCAGCAGCGACTTGTTCAGAGATAGTAAGATTCTCTACCAAAGAACATGGAGAGATTGGTAGAATACCAAATGAGTGGGCTCGGTGTCTCTTGCCTCTTGTGCGGGATAAAAAGGTTAGGGTTGAGGGGCGTTGTAAATCTGCTCCTAATGTTTTGGGCATTATGGACACCATTCTTCTGTCTATCAGTGTATTCATAAATAGTTCAATGTTTCATAAGCATCATCAGGTTTCTCTTAAGGATGCCACAAATTCCACTGATGAATCAGTGTTTCATCCTCTTCCAACCTTGTTTCGGTTGCTAGGCATGAACCCTTTTAAGAAGGCAGAATTTGCCCCTGGTGATTTGTATACAAAGAAGCGCCCTTTAAACCAAAAGGCCACATCACTAAACATCAAAGGTAAGCATCCTTTGCAGGATGGTACTGAGATTGACACTGAGGAGTCAATCTCTGAAGTAGATCTTGAAAACATTGTTGGTGTTGGAGCCAGCTCAGATTTAGAGGAAATGGATCCCCCAAGTAATCTTCAGTGTGAGCTGCGGCCCTACCAAAAGCAGGCTCTTCATTGGATGATCCAGTTGGAGAAGGGACGACTTGTGGATGAGGCAGCAACAACCCTTCATCCATGTTGGGAGGCATATTACCTGGCAGACAAGAGGGGGCTTGTTATCTATTTGAATGCATTTTCTGGTGAAGCTACAGTAGAATTTCCTAGCACACTTCAAATGGCTAGAGGAGGAATTTTGGCAGATGCTATGGGGCTTGGCAAGACCATTATGACCATAGCCCTGCTCCTTACTCATTCAGGAAGAGGTGGATTGTTAGGCAGTCAACCCATAGCTGAGCCTGTCAGTGAAGGTTGTGAAATTAGTGATACAGCACACAACTTTTCAAGCATGCCAAAGAAGGCAACAAAGTTTGCAGGTTTTGATCAACTAATGAAGCAAAAGAATGTTCTAACAAGCGGGGGCAATTTGATAATTTGTCCAATGACTCTTCTGGGGCAGTGGAAGGCAGAGATTGAAACACATATGCAGCCTGGGTCTCTGTCTATCTATGTTCATTATGGACAAAGTAGACCAAGAGATGCAAAAAATTTAGCCCAGAGTGATGTTGTAATTACCACATACGGAGTCTTAGCCTCTGAATTTTCCAGTGAGAGTACAGAGGATAATGGTGGACTTTTTTCAATTCGGTGGTTTAGAGTGGTTCTTGACGAGGCACATACTATAAAATCTTCCAAAAGCCAAATTTCTATGGCAGCCACTGCTTTAGTTGCTGACCAACGTTGGTGTCTTACTGGCACTCCTATCCAGAACAACCTTGAGGATCTTTACAGTCTTCTTCGATTTCTGAGAATAGAGCCTTGGGGTCATTGGGCCTGGTGGAACAGACTCATTCAGAAACCATTTGAGGAGGGTGATGAGAGAGGGTTGAAGTTGGTTCAATCCATTTTGAAGCCAATCATGTTGAGGAGGACCAAACATAGCACAGATCGGGAGGGAAAGCCTATCTTAGTTCTTCCCCCAGCAGATCTGCAGGTAATCTACTGTGAGCTCTCAGAAGCTGAAAAAGACCTTTATGAGGCTCTATTCAAAAGATCTAAGGTCAAGTTCGATCAGTTTGTGGAGCAAGGGCGTGTTCTCCATAATTATGCTTCGATATTGGAGTTGCTTTTACGTCTTCGGCAGTGTTGTGATCATCCATTTCTTGTAATGAGTCGAGGTGATACTCAAGAATTTGCTGATCTAAACAAACTAGCTAAGCGTTTTCTCAAAGGGGAATCAAAAGATGCACCCTCACGGGCTTATGTTCAAGAAGTTGTGGAAGAACTAAGAAAGGGAGAAGAGGGAGAGTGCCCAATATGTCTTGAAGCATTTGAAGATGCAGTACTAACACCTTGTGCTCACCGCTTATGCCGGGAATGCCTCTTGGCAAGTTGGCGAAATTCTACTTCTGGTTTATGTCCTGTTTGCAGGAAAATGGTCAGCAGGCAAGATTTTATCACAGCCCCGACTGAGAATCGATTTCAAATTGATATTGATAAGAACTGGGTGGAGTCATGCAAGGTAACGGCTCTTCTGCATGAACTCGAAAATCTTCGTTCATCTTGTTCTAAGAGCATTGTCTTCAGCCAGTGGACTGCTTTTCTAGACCTCTTGCAGATTCCTTTTAGCCGGAACAACATTCCATTTGTTCGTCTTGATGGGACTTTGAATCAGCAACAGCGTGAAAAAGTAATTAAACAATTCTCCGAAGATAGCAACATCCTGGTCTTATTGATGTCACTAAAAGCTGGTGGAGTGGGGATAAATCTAACAGCAGCTTCAAATGCTTTTGTCATGGATCCCTGGTGGAATCCAGCTGTAGAGGAACAAGCTGTTATGCGTATTCATCGTATTGGACAAACAAAGAAGGTGGCAATCAAACGGTTTATCATAAAGGGAACGGTTGAGGAGAGAATGGAGGCAGTGCAAGCGCGTAAACAGCGAATGATTTCTGGTGCCTTAACTGATCAAGAAGTTCGAACTGCACGAATTGAGGAGTTGAAGATGCTTTTTACTTAGACCATTGAAGCCAACGCCACTGCTTGGTTCATTTGCTCTTATATTTTTTTCAAATTTATTTCTAGAGCTTGCGAGAGCAAAGTTGGTTGTGACCCAAAATATGGAGGTGCTTCTTAAGTGGCATTCGAGCTAGAAGAAAGTTGCCCATGGAGAAGCAAATCACGTCTAATGGATGTCTTGATCACAGGACTGATGGCTAAATCTACGAAGGGGGAATTGAAAATTATTGATGCCATGAGTTAATTGGGGCCAGTTGTCAACAGTGCTATAGTTGGAGTCCTTGACTATTGATCATTTATTATTGTACATAGACAAATTGCATTTTTTATTTTGTGCACAAAACTGTAAAATATAATTTTTATTTATTATTTATATTCTCTTCC 3788 0.4353 MKTYVAKVGKPPLETITVLLGVEEQRRRSRKRDNPRRDNRENKGHFISCCRVKLSSERVSWCLTQLTQLSVSELSHRPSESMFTRVGLGLCKMGNKVSDGLLSTIRSFVGSEYTDMDIIRALHMANNDATAAINIIFDTPNFKFKERLGAKTNPHVSQRSCPDTATGSKKSEQRRSSSNTATVIRKSEQNGKEDIDCSGSEADAADCIINSDAAAMGEVRGRSNFAGSDWWYVGCGDLAGLSTCKGRTIKPGDEVFFKFPFKTVVASPSRGKGFGRGRQSAATCSEIVRFSTKEHGEIGRIPNEWARCLLPLVRDKKVRVEGRCKSAPNVLGIMDTILLSISVFINSSMFHKHHQVSLKDATNSTDESVFHPLPTLFRLLGMNPFKKAEFAPGDLYTKKRPLNQKATSLNIKGKHPLQDGTEIDTEESISEVDLENIVGVGASSDLEEMDPPSNLQCELRPYQKQALHWMIQLEKGRLVDEAATTLHPCWEAYYLADKRGLVIYLNAFSGEATVEFPSTLQMARGGILADAMGLGKTIMTIALLLTHSGRGGLLGSQPIAEPVSEGCEISDTAHNFSSMPKKATKFAGFDQLMKQKNVLTSGGNLIICPMTLLGQWKAEIETHMQPGSLSIYVHYGQSRPRDAKNLAQSDVVITTYGVLASEFSSESTEDNGGLFSIRWFRVVLDEAHTIKSSKSQISMAATALVADQRWCLTGTPIQNNLEDLYSLLRFLRIEPWGHWAWWNRLIQKPFEEGDERGLKLVQSILKPIMLRRTKHSTDREGKPILVLPPADLQVIYCELSEAEKDLYEALFKRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEFADLNKLAKRFLKGESKDAPSRAYVQEVVEELRKGEEGECPICLEAFEDAVLTPCAHRLCRECLLASWRNSTSGLCPVCRKMVSRQDFITAPTENRFQIDIDKNWVESCKVTALLHELENLRSSCSKSIVFSQWTAFLDLLQIPFSRNNIPFVRLDGTLNQQQREKVIKQFSEDSNILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKKVAIKRFIIKGTVEERMEAVQARKQRMISGALTDQEVRTARIEELKMLFT 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01210 1134 MobiDBLite consensus disorder prediction 153 186 - -
Bach13g01210 1134 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 784 1123 IPR027417 -
Bach13g01210 1134 Pfam Zinc finger, C3HC4 type (RING finger) 896 943 - -
Bach13g01210 1134 Gene3D - 516 784 IPR038718 -
Bach13g01210 1134 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 446 772 IPR027417 -
Bach13g01210 1134 CDD SF2_C_SNF 965 1092 - -
Bach13g01210 1134 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 227 1134 - -
Bach13g01210 1134 Pfam HIRAN domain 234 341 IPR014905 GO:0003676|GO:0008270|GO:0016818
Bach13g01210 1134 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 969 1134 IPR001650 -
Bach13g01210 1134 CDD UBA_Cbl_like 101 140 - -
Bach13g01210 1134 CDD DEXDc_SHPRH-like 459 772 - -
Bach13g01210 1134 SMART ultradead3 455 753 IPR014001 -
Bach13g01210 1134 ProSiteProfiles Zinc finger RING-type profile. 899 939 IPR001841 -
Bach13g01210 1134 SMART helicmild6 998 1081 IPR001650 -
Bach13g01210 1134 Gene3D - 788 1134 IPR027417 -
Bach13g01210 1134 SMART HIRAN_2 233 345 IPR014905 GO:0003676|GO:0008270|GO:0016818
Bach13g01210 1134 Pfam Helicase conserved C-terminal domain 970 1081 IPR001650 -
Bach13g01210 1134 Pfam SNF2-related domain 462 850 IPR000330 GO:0005524|GO:0140658
Bach13g01210 1134 ProSitePatterns Zinc finger RING-type signature. 914 923 IPR017907 -
Bach13g01210 1134 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 880 950 IPR013083 -
Bach13g01210 1134 FunFam DNA repair protein RAD5B 514 773 - -
Bach13g01210 1134 SMART ring_2 899 938 IPR001841 -
Bach13g01210 1134 SUPERFAMILY RING/U-box 885 945 - -
Bach13g01210 1134 MobiDBLite consensus disorder prediction 151 199 - -
Bach13g01210 1134 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 517 734 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01210 Bach-Chr13 16514172 16523737 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01210 93 1134 RAD5 or RAD16-like Gene Family AT5G22750 70.572 0.0 1517
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bach13g01210 SNF2_N 2.1e-87 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01210 K15505 - qsa:O6P43_000417 1640.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01210 13 16514172 16523737 Bach13g01210 13 16514172 16523737 ECH