Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01206 ATGGAGTTCTGGGGTGTTGAGGTCAAGAGTGGGGAGACTGTTAAAGTCGATCCTGAGGAATTTGATGCGTACGTACACCTTTCACAGGCTGCTCTGGGGGAGTCGAAGAAAGATAGTGGAAGTGACAAGGTGGTTATTCATTTGAAAGTTGGTGACCAGAAGCTTGTTTTGGGAACTCTTTCTAGGGAAAATTTTCCTCAGCTATCTTTTGATATCGTTCTTGACAAGGAATTTGAGCTCTCTCACAACTGGAAAAATGGGACTGTCTACTTCTGTGGCTACAAAGCTGAAGTGCCAGATGAGGAGGATGACTTTGGTGATGAGAGTGATGATGATGAGGATATCCCAGTGATCTCCAAAGACAATGGAAAACCTGACGCAAAAACTGAAGTTGAGGATGGTAAGCTTAAAAAATCTGTTGCCAAGGGTCCTTCAGGGAATCAAGTCAAGGTTGCTTCTCCAAAGAAAGATGAAGAGGAAGACTCTGAAGATGATGAATCTGATGAAGATGATAGTGGAAGTTCTGAAGAGGACATGATGGATGCTGATAGTGACGGTGATGACAGCGATAGTGATGAAGATGATGAGGAGACGCCTAAGAAGGCAATTCCAGGCAAGAAGAGACCCAACGATTCTGCATCAAAAACTCCTATTCCTCCCAAGAAAGCTAAATCTGCTACCCCACAAAAGACTGATGGTAAAAGAGGTGGTCATACAGACACTCCTCACCCTAAGAAGGGCGTGAAGACTCCCAACAGTGACTCTAAGTCTGGTGGAAAATTCTCATGCAAATCCTGCAACAAGTCTTTCAACTCTGACGATGGCCTGCAGCAACATTCAAAGGCTAAGCATGCTTGA 858 0.4441 MEFWGVEVKSGETVKVDPEEFDAYVHLSQAALGESKKDSGSDKVVIHLKVGDQKLVLGTLSRENFPQLSFDIVLDKEFELSHNWKNGTVYFCGYKAEVPDEEDDFGDESDDDEDIPVISKDNGKPDAKTEVEDGKLKKSVAKGPSGNQVKVASPKKDEEEDSEDDESDEDDSGSSEEDMMDADSDGDDSDSDEDDEETPKKAIPGKKRPNDSASKTPIPPKKAKSATPQKTDGKRGGHTDTPHPKKGVKTPNSDSKSGGKFSCKSCNKSFNSDDGLQQHSKAKHA 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01206 285 ProSitePatterns Zinc finger C2H2 type domain signature. 263 284 IPR013087 -
Bach13g01206 285 MobiDBLite consensus disorder prediction 227 250 - -
Bach13g01206 285 ProSiteProfiles Zinc finger C2H2 type domain profile. 261 285 IPR013087 -
Bach13g01206 285 MobiDBLite consensus disorder prediction 101 115 - -
Bach13g01206 285 Gene3D Classic Zinc Finger 249 285 - -
Bach13g01206 285 MobiDBLite consensus disorder prediction 158 195 - -
Bach13g01206 285 MobiDBLite consensus disorder prediction 101 285 - -
Bach13g01206 285 Gene3D Nucleoplasmin core domain 1 100 - -
Bach13g01206 285 MobiDBLite consensus disorder prediction 116 139 - -
Bach13g01206 285 MobiDBLite consensus disorder prediction 251 276 - -
Bach13g01206 285 FunFam Histone deacetylase HDT1 1 100 - -
Bach13g01206 285 Pfam Nucleoplasmin-like domain 3 94 IPR041232 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01206 Bach-Chr13 16474702 16477090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01206 1 95 C2H2 Transcription Factor Family AT3G44750 63.158 7.69e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach13g01206 NPL 6.9e-13 CL0055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01206 - - lang:109358867 300.441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01206 13 16474702 16477090 Bach9g00275 9 2004843 2007331 BWGD
Bach13g01206 13 16474702 16477090 Bach13g01206 13 16474702 16477090 ECH