Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01196 ATGGACTTTGAGAACGATTCTTCATCTCCATCTTCGCCATCATCTTCTTCTTGTCCATGTCATCTATCACCATGCTCAATTACCAACCCTAAATATCCATCTTCTGATTCACAATATTTAGCTACATCTCAGAAGAGAAAAGCAGGAAGAAAGAAGTTCCATGAGACTCGGCATCCCGTGTATCGGGGAGTTCGGCAGAGAAATGGGGACAGATGGGTTTGTGAAGTCAGGGAACCAAACAAGAAGTCAAGGATATGGCTTGGCACTTATCCTACGCCGGAAATGGCAGCTAGGGCACATGATGTGGCTGCCCTAGCACTTAGAGGTAGCTCAGCTGTGCTTAATTTTGCTGACTCAGCATCTATTCTTCCAGTTGCAAGGTCATCTTCAGCTAGAGATATAAGAGCTGCTGCAGCAAAAGCTGCTGAGGCTTTTAGACCAACCAGCTGTTCTTCCTTAAAAAGCTCACATGATGTAGAGAGTGGAAAGGTTATGGAGGGTTCATTACCAATGGATGATCTTAATGAAATCACAGGGAAAAATCATAGTAATGATCAATACTCTTCAATACCATTTTTGGATGAGGAGGCTATGTTTAATGAGCTGGGTTTTTTAGATAGAATGGCAGAGGGTTTGTGTCTTACCCCACCGTCTATGGAAAGAGCATTTGATTGGGACGACATTGGTTGTGACATGGACTTTTCTTTGTGGAGGTACTAA 720 0.4319 MDFENDSSSPSSPSSSSCPCHLSPCSITNPKYPSSDSQYLATSQKRKAGRKKFHETRHPVYRGVRQRNGDRWVCEVREPNKKSRIWLGTYPTPEMAARAHDVAALALRGSSAVLNFADSASILPVARSSSARDIRAAAAKAAEAFRPTSCSSLKSSHDVESGKVMEGSLPMDDLNEITGKNHSNDQYSSIPFLDEEAMFNELGFLDRMAEGLCLTPPSMERAFDWDDIGCDMDFSLWRY 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01196 239 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 9 239 IPR045277 GO:0003700
Bach13g01196 239 Pfam AP2 domain 59 109 IPR001471 GO:0003700|GO:0006355
Bach13g01196 239 SMART rav1_2 60 123 IPR001471 GO:0003700|GO:0006355
Bach13g01196 239 ProSiteProfiles AP2/ERF domain profile. 60 117 IPR001471 GO:0003700|GO:0006355
Bach13g01196 239 FunFam Ethylene-responsive transcription factor 2 59 118 - -
Bach13g01196 239 CDD AP2 61 119 IPR001471 GO:0003700|GO:0006355
Bach13g01196 239 SUPERFAMILY DNA-binding domain 60 119 IPR016177 GO:0003677
Bach13g01196 239 PRINTS Ethylene responsive element binding protein signature 83 99 IPR001471 GO:0003700|GO:0006355
Bach13g01196 239 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Bach13g01196 239 Gene3D AP2/ERF domain 60 118 IPR036955 GO:0003700|GO:0006355
Bach13g01196 239 MobiDBLite consensus disorder prediction 1 44 - -
Bach13g01196 239 MobiDBLite consensus disorder prediction 1 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01196 Bach-Chr13 16378718 16379437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01196 40 239 AP2-EREBP Transcription Factor Family AT4G25470 52.239 2.98e-60 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach13g01196 AP2 1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01196 - - qsu:112024536 230.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01196 13 16378718 16379437 Bach9g00285 9 2084841 2085587 BWGD
Bach13g01196 13 16378718 16379437 Bach13g01196 13 16378718 16379437 ECH