Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01187 ATGAACGGTGAAAGCCGAAGACGGGACCGGGACCGGCGAGACCCGCGCAGATCAAAGAAGCAGAAGCTAATTCGCACCGCTGAGGAAGAGCTTGAGTCAAAGCTAGGGTTCGATCTATTCTCCGAGGGCGAAAAAAGGCTTGGATGGTTGCTTAACTTTGCATCTTCATCTTGGGAGGACGAAGAGACCCAAAAAGTCTATAGCTGCATTGATCTTTATTTTGTTACACAGGATGGTTCCACATTTAAGTCAAAATACAGGTTTCGCCCTTATTTCTATGCAGCCACAAAGGATAAAATGGAGATGGATGTTGAAGCATATCTGAGACGATGCTATGAAAATCAGATTGCAGATATTGAAATTGTGGAGAAGGAAGACCTTGATCTTAAAAACCATTTGTCTGGGTTACAAAAATCTTATTTAAAGCTATCTTTTGATACCGTGCAACAACTGATGAATGTGAAGAGTGATCTGATGCATGTTGTGGAAAGAAATCAAGCAAAGTCTGATACTGCAGAAGCCTATATGTACATTTTAACTGTAAGAAGAGAACAAAAACCACAAGATTTTCTAGATTGCATCATTGATCTTCGCGAGTATGATGTTCCTTATCACGTTCGCTTTGCCATTGACAACGATGTAAGGTGTGGCCAGTGGTATGATGTTAGTGTATTTAATACTGGGGTTGCACTTGAGAGGAGAATGGATCTTCTGCAGCGTGCTGAAGTTCGTATCTGTGCGTTTGACATTGAGACAACGAAACTTCCATTGAAGTTTCCTGATGCTGACTATGATATGATTATGATGATTTCGTACATGGTAGATGGACAAGGGTATTTAATAATTAATCGAGAGTGTGTTGGAGATGATATAGAGGATTTGGAGTACACTCCAAAACCAGAGTTTGAAGGGTGTTTCAAGGTGACAAATGTCCTAAACGAGGTTGAGCTTCTTAAATTGTGGTTTTCCCATATGCAAGATGTGAAGCCTGGTATATATGTGACGTATAATGGAGATTTCTTTGATTGGCCATTTCTGGAAAGCAGGGCAGCCCATCATGGGGTCAAAATGAGCGATGAGTTAGGGTTTCAATGTGACAAAGGTCAAGGAGAATGTCGTGCAAAATTTGCTTGTCATTTGGACTGTTTTGCTTGGGTTAAACGTGATAGTTATCTCCCTCAAGGGAGCCAAGGCCTGAAGGCTGTAACAAAGGCAAAATTGGGTTATGATCCCCTGGAGGTGAACCCTGAGGATATGGTTCGCTTTGCAAAAGAAAAGCCTCAGATGATGGCCTCCTACTCCGTTTCTGATGCTGTGTCAACTTATTACTTGTATACAACCTATGTTCATCCCTTTATTTTCTCTCTCGCGACTATTATACCCATGTCACCGGACGAGGTTTTGCGCAAAGGTAGTGGGACCCTCTGTGAAATGTTACTCATGGTCCAGGCATACAAGGCGAATGTTATTTGCCCGAACAAACACCAATCTGATCCAGAGAAGTTTTATAACAGTCACCTTCTTGAGAGTGAGACATATATAGGTGGCCATGTGGAATGCCTTGAAAGTGGCGTATTCAGATCTGATCTTCCAACTAGTTTTACACTTGAACCATCTACCTATGAGCAACTGATCAATAACCTTGATCGAGATCTGCAATATGCTATAAGAGTGGAGGGTAAGATGGACTTGGAATCTGTCTGTAATTATGATGAAGTGAAGAATGCTATCATGGAAAAGCTAATAAAATTGCGTGATGAGCCAATACGGGAGGAATGCCCCCTCATTTATCATCTCGATGTAGCTGCTATGTATCCAAACATTATTTTAACAAACAGACTTCAGCCACCATCAACAGTGACGGATGAGGTCTGCACAGCATGTGATTTCAACCGTCCTGGGAAAACTTGCCTACGGAAGCTTGAGTGGGTTTGGCGCGGAGAGATATTCATGGCAAAGAGAAGTGACTATTATCATTTAAAAAAGCAAATTGAGTCGGAGTTTGTTGATGGTGCTGATGGTCAGTCATCAAAATCTTTTCTCGATCTGCCAAAGTCAGAGCAACAATCAAGGCTAAAAGAGCGTCTAAAGAAATACTGTCAGAAGGCATATAAACGGGTACTTGACAAACCTGTTACTGAACTTCGTGAAGCAGGGATATGCATGCGTGAAAATCCATTTTATGTTGACACTGTTCGCAGCTTTCGTGATAGGAGATATGAATATAAAGGTCTTAATAAGGTTTGGAAGGGAAAGCTGTCTGAAGCCAAGGCCAGTGGAAATTCTATAAAGATCCAGGAAGCACAAGACATGGTAGTGCTTTATGATTCATTGCAACTTGCTCACAAGTGTATACTTAATTCCTTTTATGGATATGTCATGCGCAAGGGTGCAAGATGGTACTCCATGGAAATGGCGGGGGTTGTCACATATACTGGTGCCAAAATAATTCAGAATGCCCGCTTGCTGGTAGAGAAAATAGGAAAACCACTTGAATTAGACACAGATGGTATCTGGTGTGCTCTTCCTGGATCTTTTCCAGAAAATTTTACTTTTAAAACAAAAGGCTCAAAGAAGTTGACAATCTCATACCCTTGTGTTATGCTTAACGTGGATGTGGCAAGAAATAATACAAATGATCAGTACCAGACACTCACAGATCCAATTAGGAAAACTTATACAACTCATAGTGAATGCTCTATTGAATTTGAAGTGGATGGACCATACAAGGCAATGATTCTCCCTGCTTCCAAAGAAGAAGGAATTCTAATCAAGAAGCGATATGCTGTTTTTAATGATGATGGGACTTTAGCAGAGCTGAAAGGTTTTGAGATCAAGCGTAGAGGTGAACTCAAGCTAATAAAAGTATTCCAGGCTGAACTTTTCGACAAATTTCTCCATGGGTCAACATTAGATGAATGCTACTCCGCTGTTGCTTCTGTGGCAAACCGCTGGCTTGATCTTCTTGACAACCAAGGGAAGGATATTGCAGACAGTGAGTTACTTGATTACATATCAGAGTCAAGCACTATGAGCAAGTCTTTAGCTGATTATGGTCATCAGAAGTCTTGTGCTGTTACCACTGCTAGACGGCTTGCTGACTTTCTTGGTGATACAATGGTCAAAGATAAAGGTCTTCGTTGTCAGTACATAGTAGCATGTGAACCTAAGGGAACACCTGTGAGTGAGCGTGCTGTTCCAGTGGCAATATTTGAAACTGATGCTGAAGTAATGAAGTTCTATGTCCGAAAATGGTGCAAGGTTTCGTCAGATGTTGGTATTCGATCCATAATTGACTGGTCCTATTACAAGCAACGACTCAGTTCTGCAATTCAAAAAATTGTCACTATTCCTGCTGCAATGCAAAAGGTTGCTAATCCAGTTCCTAGGGTAGTTCATCCTGATTGGTTGTATAAGAAGGTCCGTGAGAAGGAGGACAAATTTCGCCAACGAAAATTAGTTGATGTCTTTAACTCAATGAGCAGGGATATCCAGTCAAAAAAGCATGATGATTCTAATAATGCCTCCCATGTAATGGATGGAGACTTGGAAGACTTTGGAAACAAAGGCAAGAGTTCCATTACTGGACCTAGGCCTATTATACGACATTTTGAAGCTAATAGTGAGTTGCATTCGGTGAAGCGCAATGGCCAAGTAGATTCTGAGCGACGTCATTATGATAACAGCAGCAAGCGTCAGCCAGTTGCACAGTCAGAACAAATTGAAATATCATCTGAAGATGTTGACAGAACCGCGGATTATCAAGGATGGCTTCAAATGAAGAAGAGAAAGTGGAAATTTATACTTGAAAAGAGAAAGAAACAAAGATTGGATAAATCGAAGAGATCAGCCCGAGTTAATGGTGTTCTTGAAAATCCGAGCGGTATGATATATCACAAAGCTCAGGGCAGAAGTAATGTTGGTTCATATTTTAGAAGGCATGAGGTCGCCCTAACGCAGAGCTATTGGCAGATAATACAGCTAGTTAACGGATCGCAGAATGCACAGTTTTTTGCTTGGGTTCTTGTTGATGGGGTTATGCTTAAGATTCCCGTATCTGTTCCTAGAGTCTTCTACCTAAATTCTAAGTCACCTATTACTGAAGAATTTCTGGGTAAGCGTATCAACAAGACTCTTCCGCATGGAAGGCACAATTATAACCTGTATGAGGTTACAATTACTGAAGTTCAATTAAGGGAAGCTAGCAAAAAGATTGCAGCTCTTTTAGCGGATCCTGATGTCGAGGGAATATATGAAACGAAGGTGCCACCGGAGTTTAATGGAATAGTCCGGCTTGGTTGTGTATGCAAGGTGGATAAGACCGCTAAAAAACGTAGTCTACAAGATCCTTGGAGTGTGAGTGAGTTGCACATGAAGACCACAACAGAATGTACTTATCTGGAACAATCCATATCGTTCTTTTACTTATATCACAGCATCTCAGAGGGACGAGCTATATATGTTGGTTACTTTCCTGCATCAAAAACAATATATGTTGTGGTAGTTAATCCCTATCAGAACAAAGATTTGTCTCCATCTTTTCTCGAAAGGCAATTCCGTGATGCTTGCCAAATATTGGCTATCGAGGCACCACCCAGGAATTCTATCATTTTTAAGGTGGAATATGTTGCACATGTCAAGGATGCCGAGACATTGATGCAGAGAGCAATAAACGATCACAGGAATGAACATGATGGGCCTATGGTTGCTGTTATTGAATGCCCAAATCCTCAACTAATGAAATTGGGTATACGAGCTCTAGATGACTTCCCATGCCTGAACATTCCGTCTAATGCGCGTGATAGTCAGTACCAGGTTCTTGGGTGGCAACAAGTGGCTGCAAAAATTGGAATGCAACGTTCTGCTGCGTCAGTCCAGTGGCTAAATGAAAGGATTGCTCTCTCAAGATATGCTCATGTGCCGCTGGGAAATTTTGAACTTGACTGGCTTATATTTACCATGGATATCTTCTTTTCAAGAGCATTGCGTGATAACCAACAGGTACTTTGGATATCTGATGATGGTCTTCCAGATTTAGGTGGTACTCATGAAGAAGAGACGTGTTTTGCTGATGAGGTCCATCAACCTGTTCTGACCTACCCTGGAGCTTACAGGAAAATTACTATAGAGCTAAAGATTCACCACTTGGCTGTCAATGCTCTTTTGAAAAGCAATCAAGTTAATGAAATGGAAGGAGGTGCTCTGTTAGGATTTGACCACGACTTTAATTCTGGAGCACTTGACATAAATGATCACAATGGCTATGATGAATCTACCTCATGTGCACATGCCTTTAGAGTCCTAAAACAGTTGATTCACAGGTGCCTCGCAGATGCAGTTACTTCTGGAAATGTATATGCTGATGCAATATTGCAGCATCTATATCGATGGCTTTGCAGTCCTCAATCAAAACTTCATGACCCATCTCTTCACCAACTACTTCACAAGGTCATGCAAAAGGTTTTTGCATTGTTATTGGCAGAGTTTCGCAAGTTGGGCGCAACAATTGTGTTTGCAAACTTCTCAAAGATCATTTTAGACACAGGAAAATACGATCTGTCTGCAGCCAAAGCTTATTGTGATAGTTTGTTGAAAACTCTACAATCTAGAGATCTATTTGAATGGATTGAGCTTGAACCGCGGAAGTACTGGCACTCATTGCTTTTCATGGATCAGTATAACTATGGTGGAATACCTGCAAAATTTGACGAAGTTATAACTGAGACATCTAAAGCTGAGATCGAAGCGGATTGGAACATAGCGAACAATTTACCCCATGAAATTCAGGATCATTTTCTTTTGATTGCTTCTGAATTCATGTATATACCGTGGAAGTATACACAAAAACAAGCTGCAATTAGGGCTTCATCACAAAATGGCGATTTCTGCACGCCATCAATTACTATTGGCACTGCAGAGGCTTTTGAATCAAGCATAACAGAATATATTAAAGGCCAGATCAGCTCTTATTTCACGGATAAACTTTTGGGAATTGTTCGTGATATTGTAATTCATATGAAGGAGATGAACAAATCAGAGAAAGCCCAAATTATGTCGTCTGGCCTTCCCCAAATTGCGGGAGATTTCCATAGAGGGGATGCGGCCTTGGAATTTATCAAGCATGTCTCTGCTGTTTTAGCACTCGACCATAATGTGCAGCATGATGTTTTGGTGATGAGAAAGAATCTGCTCAAATACGTTCGCGTGAGAGAGTTCGCTCCAGAAGCTGAGTTTCGTGATCCAGGCCCTTCTTTCATCTTACCAAACGTCATATGCAGCTATTGTAATGACTGCAGAGACTTGGATTTGTGTCGTGTCCCTACTTTATTGACCGAAGAGTGGCGATGTGCGGTGGAACAGTGTGCTCAGCCTTATGACAGAGAGGTAATGGAGAACGCTCTTCTTCAGATCGTACGGCAGAGAGAACGTCTATACCACCTGCAGGACTTGGCGTGTCTCAGATGCAACCAGGTGAAAGCTGCACATTTGGCTGAGCAATGCGCATGTGCTGGCTCATTTAGGTGCAAAGAAGATAGAACTGAATTTCGCTCAAAGATGCAGGTTTTCTTGAAGGTAGCTGTTCATCAAAAGTTCCAACTTCTCCAAGAATGCACCTCGTGGATTCTAGAACTTAGATAGCTGTATACCTAATTAAACATCTA 6662 0.4141 MNGESRRRDRDRRDPRRSKKQKLIRTAEEELESKLGFDLFSEGEKRLGWLLNFASSSWEDEETQKVYSCIDLYFVTQDGSTFKSKYRFRPYFYAATKDKMEMDVEAYLRRCYENQIADIEIVEKEDLDLKNHLSGLQKSYLKLSFDTVQQLMNVKSDLMHVVERNQAKSDTAEAYMYILTVRREQKPQDFLDCIIDLREYDVPYHVRFAIDNDVRCGQWYDVSVFNTGVALERRMDLLQRAEVRICAFDIETTKLPLKFPDADYDMIMMISYMVDGQGYLIINRECVGDDIEDLEYTPKPEFEGCFKVTNVLNEVELLKLWFSHMQDVKPGIYVTYNGDFFDWPFLESRAAHHGVKMSDELGFQCDKGQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVSTYYLYTTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYNSHLLESETYIGGHVECLESGVFRSDLPTSFTLEPSTYEQLINNLDRDLQYAIRVEGKMDLESVCNYDEVKNAIMEKLIKLRDEPIREECPLIYHLDVAAMYPNIILTNRLQPPSTVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMAKRSDYYHLKKQIESEFVDGADGQSSKSFLDLPKSEQQSRLKERLKKYCQKAYKRVLDKPVTELREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCALPGSFPENFTFKTKGSKKLTISYPCVMLNVDVARNNTNDQYQTLTDPIRKTYTTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLDECYSAVASVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLADYGHQKSCAVTTARRLADFLGDTMVKDKGLRCQYIVACEPKGTPVSERAVPVAIFETDAEVMKFYVRKWCKVSSDVGIRSIIDWSYYKQRLSSAIQKIVTIPAAMQKVANPVPRVVHPDWLYKKVREKEDKFRQRKLVDVFNSMSRDIQSKKHDDSNNASHVMDGDLEDFGNKGKSSITGPRPIIRHFEANSELHSVKRNGQVDSERRHYDNSSKRQPVAQSEQIEISSEDVDRTADYQGWLQMKKRKWKFILEKRKKQRLDKSKRSARVNGVLENPSGMIYHKAQGRSNVGSYFRRHEVALTQSYWQIIQLVNGSQNAQFFAWVLVDGVMLKIPVSVPRVFYLNSKSPITEEFLGKRINKTLPHGRHNYNLYEVTITEVQLREASKKIAALLADPDVEGIYETKVPPEFNGIVRLGCVCKVDKTAKKRSLQDPWSVSELHMKTTTECTYLEQSISFFYLYHSISEGRAIYVGYFPASKTIYVVVVNPYQNKDLSPSFLERQFRDACQILAIEAPPRNSIIFKVEYVAHVKDAETLMQRAINDHRNEHDGPMVAVIECPNPQLMKLGIRALDDFPCLNIPSNARDSQYQVLGWQQVAAKIGMQRSAASVQWLNERIALSRYAHVPLGNFELDWLIFTMDIFFSRALRDNQQVLWISDDGLPDLGGTHEEETCFADEVHQPVLTYPGAYRKITIELKIHHLAVNALLKSNQVNEMEGGALLGFDHDFNSGALDINDHNGYDESTSCAHAFRVLKQLIHRCLADAVTSGNVYADAILQHLYRWLCSPQSKLHDPSLHQLLHKVMQKVFALLLAEFRKLGATIVFANFSKIILDTGKYDLSAAKAYCDSLLKTLQSRDLFEWIELEPRKYWHSLLFMDQYNYGGIPAKFDEVITETSKAEIEADWNIANNLPHEIQDHFLLIASEFMYIPWKYTQKQAAIRASSQNGDFCTPSITIGTAEAFESSITEYIKGQISSYFTDKLLGIVRDIVIHMKEMNKSEKAQIMSSGLPQIAGDFHRGDAALEFIKHVSAVLALDHNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPGPSFILPNVICSYCNDCRDLDLCRVPTLLTEEWRCAVEQCAQPYDREVMENALLQIVRQRERLYHLQDLACLRCNQVKAAHLAEQCACAGSFRCKEDRTEFRSKMQVFLKVAVHQKFQLLQECTSWILELR 2212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01187 2212 SMART DUF1744_2 1514 1898 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Bach13g01187 2212 Pfam DNA polymerase family B 758 1071 IPR006134 GO:0000166|GO:0003677
Bach13g01187 2212 CDD POLBc_epsilon 506 1123 - -
Bach13g01187 2212 Gene3D - 942 1126 IPR042087 -
Bach13g01187 2212 Gene3D - 240 470 IPR036397 GO:0003676
Bach13g01187 2212 SMART polmehr3 241 844 IPR006172 GO:0000166|GO:0003676|GO:0003887
Bach13g01187 2212 MobiDBLite consensus disorder prediction 1205 1230 - -
Bach13g01187 2212 CDD DNA_polB_epsilon_exo 242 445 - -
Bach13g01187 2212 Gene3D DNA Polymerase, chain B, domain 1 57 234 - -
Bach13g01187 2212 FunFam DNA polymerase epsilon catalytic subunit 942 1126 - -
Bach13g01187 2212 SUPERFAMILY Ribonuclease H-like 61 469 IPR012337 -
Bach13g01187 2212 SUPERFAMILY DNA/RNA polymerases 488 1116 IPR043502 -
Bach13g01187 2212 Pfam DNA polymerase family B, exonuclease domain 76 402 IPR006133 -
Bach13g01187 2212 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 18 2210 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Bach13g01187 2212 Pfam Domain of unknown function (DUF1744) 1532 1898 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Bach13g01187 2212 FunFam DNA polymerase epsilon catalytic subunit 242 470 - -
Bach13g01187 2212 Gene3D Palm domain of DNA polymerase 755 938 IPR023211 -
Bach13g01187 2212 MobiDBLite consensus disorder prediction 1 23 - -
Bach13g01187 2212 FunFam DNA polymerase epsilon catalytic subunit 58 229 - -
Bach13g01187 2212 FunFam DNA polymerase epsilon catalytic subunit 758 938 - -
Bach13g01187 2212 MobiDBLite consensus disorder prediction 1205 1243 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01187 1 2102 Core DNA Replication Machinery Family AT1G08260 71.381 0.0 3090
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01187 K02324 - cave:132163250 3773.4