Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01177 ATGGCGGAAGAACATCGATGCCAAGCTCCACAGTTATGCACAAACAACTGCGGTTTCTTTGGTAGCCCCACAACGCAAAATCTTTGTTCCAAATGCTATCGAGATTTGCAACTCCAGGAACAACAATCCTCTTCCGCGAAGCTTGTTCTCAACCAAACCCTAACCCCTGCGCGGTCGACGATCTCAGAACCCTCATCTTCATCGCCAGAAGCGGTTGCAGTTCTCGCCGTACCGTCATCTTCTCCTGAACCTGATCCGCCCCAGGCTGTCGAGGAGGCGAAAAGTGCATCACCGTCGCAGCCGCAGCAGCAGCATCCAAATAGGTGCATGACATGCAGGCGGCGCTTGGGTCTGACTGGGTTCAAGTGCCGGTGCGAGTTGACATTTTGTGGTACCCACCGTTACCCGGAACAGCACGGGTGCGAGTTCGATTTCAAAGGGATGGGTAGGGAGCAGATCGCCAAGGCAAATCCCGTCGTCAAGGCAGAGAAGCTCGAGAAGATCTGA 507 0.5424 MAEEHRCQAPQLCTNNCGFFGSPTTQNLCSKCYRDLQLQEQQSSSAKLVLNQTLTPARSTISEPSSSSPEAVAVLAVPSSSPEPDPPQAVEEAKSASPSQPQQQHPNRCMTCRRRLGLTGFKCRCELTFCGTHRYPEQHGCEFDFKGMGREQIAKANPVVKAEKLEKI 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01177 168 MobiDBLite consensus disorder prediction 59 74 - -
Bach13g01177 168 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Bach13g01177 168 Gene3D - 1 70 - -
Bach13g01177 168 PANTHER AN1-TYPE ZINC FINGER PROTEIN 9 168 - -
Bach13g01177 168 MobiDBLite consensus disorder prediction 93 107 - -
Bach13g01177 168 ProSiteProfiles Zinc finger AN1-type profile. 103 149 IPR000058 GO:0008270
Bach13g01177 168 Gene3D - 84 164 IPR035896 -
Bach13g01177 168 SUPERFAMILY AN1-like Zinc finger 90 163 IPR035896 -
Bach13g01177 168 MobiDBLite consensus disorder prediction 59 107 - -
Bach13g01177 168 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
Bach13g01177 168 SMART AN1_Zf_4 109 146 IPR000058 GO:0008270
Bach13g01177 168 FunFam Zinc finger AN1-type containing 6 84 164 - -
Bach13g01177 168 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 55 - -
Bach13g01177 168 Pfam AN1-like Zinc finger 109 145 IPR000058 GO:0008270
Bach13g01177 168 Pfam A20-like zinc finger 11 34 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01177 Bach-Chr13 16215388 16215894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01177 1 168 C2H2 Transcription Factor Family AT3G52800 54.651 1.03e-50 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01177 - - pcin:129295477 236.113