Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01141 ATGGAGGGGGATACGAGGGAAGCGCAGATGTCAATTGCTGCGACTTCTATGTTTCCTGGCTTTAGGTTCTGTCCCACGGACGAGGAACTGATTTCATATTATCTCACCAAGAAGTTAGATGGGCATGAAGAGAGTGTGCAAGTCATTTCTGAGGTTGAAATTTGTAGTTTTGAGCCTTGGGATTTGCCAGCCAAATCATTCATTCAATCGGAAAACGAGTGGTTCTTCTTCTCCTCTCGAGGAAGAAAGTACCCACATGGCTCACAAAGTAAGAGGGCAACTGAACGTGGTTATTGGAAGGCCACTGGGAAAGAGCGCAATGTAAAGTCAGGTTCTAATGTCATAGGTACCAAGCGGACTCTGGTATTCCACTTGGGTCGTGCACCAAAAGGGGAAAGGACTGAATGGATTATGCATGAGTACTGCGTTATTGACAAAGCTCAGGATTCTTTGGTTGTTTGTCGCCTCAAGAGGAACACTGAGTTCCATTTGGATGATGCCTCAAATAAAGCCACTTCAAATCAAAGGCAAGCTGGAACTTCACATGAAAGTAACACTGCTATCTCTGATACTGGTACTAATCAATTGGGTGTCTCTGAGCATAAAGGGGCTGGATGTAGCTCCAAACGGAGCAGCAGCAGTTATGGTTCTCCCTCAGTGGAGCAGATTGATTCTGCCACCGAATCCAACCGCAGATCAAGTCCAACAAATGACCCTAACTTTACAGAATCTACCAGTCACCAAAAGGATGTGGATGACGAGGTATATGCTGATATACTAAAAGAGGATATCATCAAGCTAGATGAATCTTCAATGGCGCAAGAGTCCGACACAAGGTTACAGGATCCAGCACAGATACCTCTGTCCCAAGGCACAGCAGAACGAAGAATAAGATCGAAGATTGAGAAATCAAGGCATTGTCCTGCTGGAGTAGTCGAGTTTGAAAAACCAAGCCAAACAGCTACACGAGTTTGTCTCCCAACAAGCTCAAAGCACTCATCAAGCAGCAGCTTCTTCACCCTGTTTGTTTTGCTCGTTTTCTTCTCGGTTGCTCTATTTTTGTCTTTATTGGGAGGTTTTAAACAAGAGAAAAGTTGTGGGATATCTGGTTTCGAATGTAAATTATAA 1128 0.4424 MEGDTREAQMSIAATSMFPGFRFCPTDEELISYYLTKKLDGHEESVQVISEVEICSFEPWDLPAKSFIQSENEWFFFSSRGRKYPHGSQSKRATERGYWKATGKERNVKSGSNVIGTKRTLVFHLGRAPKGERTEWIMHEYCVIDKAQDSLVVCRLKRNTEFHLDDASNKATSNQRQAGTSHESNTAISDTGTNQLGVSEHKGAGCSSKRSSSSYGSPSVEQIDSATESNRRSSPTNDPNFTESTSHQKDVDDEVYADILKEDIIKLDESSMAQESDTRLQDPAQIPLSQGTAERRIRSKIEKSRHCPAGVVEFEKPSQTATRVCLPTSSKHSSSSSFFTLFVLLVFFSVALFLSLLGGFKQEKSCGISGFECKL 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01141 375 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 238 - -
Bach13g01141 375 Pfam No apical meristem (NAM) protein 19 142 IPR003441 GO:0003677|GO:0006355
Bach13g01141 375 SUPERFAMILY NAC domain 10 158 IPR036093 GO:0003677|GO:0006355
Bach13g01141 375 MobiDBLite consensus disorder prediction 167 253 - -
Bach13g01141 375 MobiDBLite consensus disorder prediction 167 244 - -
Bach13g01141 375 ProSiteProfiles NAC domain profile. 17 159 IPR003441 GO:0003677|GO:0006355
Bach13g01141 375 Gene3D NAC domain 26 165 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01141 Bach-Chr13 15970193 15971934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01141 5 283 NAC Transcription Factor Family AT2G27300 52.143 4.85e-93 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bach13g01141 NAM 4.2e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01141 - - cam:101495489 440.269