Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01131 ATGGAGTCTCGAATGGATCAGTATGAGATCATGGAGCAGATCGGTCGTGGAGCTTTTGGAGCTGCTATTCTCGTCCATCACAAGGCCGAGAAGAAGAAGTACGTGTTGAAGAAAATCAGGCTTGCGCGCCAGACTGAACGCTGTAGGAGATCTGCTCATCAAGAAATGGCTCTAATTGCTCGAATCCAACACCCTTACATTGTGGAATTCAAGGAAGCATGGGTTGAGAAGGGTTGCTATGTCTGCATTGTTACTGGCTATTGTGAAGGGGGAGACATGGCTGAATTAATGAAGAAATCAAATGGGGTTTACTTTCCGGAGGAGAAACTCTGCAAGTGGGTTACCCAGTTACTATTGGCAGTTGAATACCTTCATTCCAATTTTGTTTTACATCGCGACCTAAAGTGTTCCAACATTTTTCTTACCAAGGATCAGGATGTTCGCCTTGGGGATTTTGGGCTTGCGAAGACTCTAAAAGCGGATGACTTGGCTTCTTCGGTTGTTGGAACTCCCAATTACATGTGTCCCGAACTGCTTGCAGATATTCCTTATGGATTCAAATCTGATATTTGGTCGCTAGGCTGCTGTATATATGAGATGGCTGCTCATCGCCCTGCATTTAAAGCTTTTGATATGGGTGGATTGATAAGCAAGATAAATCGTTCCTCTATTGGCCCATTGCCCTCCTGTTACTCCCCATCCTTGAAAATACTGATCAAGGGTATGCTGAGAAAAAATCCAGAGCATCGGCCAACAGCGTCTGAGGTCTTAAAGCACCCTTATTTGCAACCTTATGTTGATCAGTATCGTCCATCTTTCAGTCCTCCATCAGCCTGTTCTCTTGAAAAGCCAATTTCTACTGCCCGTGATTCTCGAAGGAGGATGGCTGAAAGTCAAAACAGTTGTAGTTCGAGTAGTGACAGAGATAGCTTGATTTCAAATGAGAGAAGCGTTTCATCAGCAGTGCCAAAGTGCGATGACAAAGGCACTGAAACAGATCTGGCATCTATTGATGATGAAGATGGCTCTGAGCATCATGTGCCAAGTGAAGAAGAAAATGGCTCTCGCACTGGAAATGTCAAAGCTGACCAGCAAGAGTTGATGAAACCATCTCAAATTGAAAAACGATCCAATGTTGAATCTAAGCAACCAAAAACAATTAAAAATATAATGATGGCATTAAAAGAGGGAAAAGTTAGAGTAAATAGCTCTCCAATGAGAGGTAACCGCATAAAGGCTGGGGGTACATCTGTGCAGAAAGCCAATACAGAGACATTGCCTAAATTGCCCAAATCTGCTGCTGTTGTTCCTGGCTCAAAGTCTAATTTAGAGTCACCACGATCTGCACCTGAAAAAGCAACTCCTGAATCTGGAAAAAGAATCCAGGGATCAAATCCTTTGAAGCATCTGTCACCAGTGGTAGAGTCCTCAGTAAAAATTAAACCCAGAAATGATGGGACGCCCTCATCTGCTCCTACTAAACAAGCGGAAGGAGATGGAGTTCCTCCCAAACCAAGGCTAAGGACACCTCCAAGCTTACTTAGAAGACCTTCTTTTGTAGGACGAGTGAGACAGGCTGGGCTTGATGTTCCAAATGGAACAAGTGATACAGCGAAATTAGGTCTAAATATAGTACCTCAGGAGCCTGAAAAGAATCCTCCTCAGTTGCCCAATGGTCATGTGCCACACAATTTCAGCGAGACTACAAGAGAGCCTCAAAAACCTTTTGAAAGAGGTTCAAAAGGAGTGCAAACAGATAGCAGCAATTCTGTTTCATCTTCAGCTTCTATTCAAGGATTTGAGCTTTCTGATGATGCGACAATCTTTATTGACATGAGAGAACAGACACTCCCTGATCATGAGAGTGTAACCCACAATGGAAGTGTGGAACCATGTTCACACATTAGCTCAACTGCTACCTATTCCCACAGTCAGATGACCATAAATATGACCAGTGAAGCATCTGAGACTACCCTGAATCTTCGAGATACAACTGCCAGTAATGAGAGAGTAGGTTTGAATTTAACTCCTCATCACCCCATTCCAGATTCTAAGGAAACATCTGCTTCTGAAGATTGTTTTTCCATAAATCAAACCAGTATATCTGCAACCTATGGTTGTCACAATACATCAGTAAGTCTTCCTGTGGAAGCCAGTGAACAAGTCAAAGATCTTCAAAATACTGCTAAGGTCACTTCAAGTGAGTCTCTTGAACTTCCCCACACTAATTCTGGAGAGAAATTTGTTTGTGAAGAGGTTGCTCCAGTAAGCAATCCCAATAATAGACCAAATGTAGTAGGGCAGCCAAAACTTATGTGTGTTTCTACTGGTGATGATAAGTTCACAGTAAGGGAACGGTTATCTTCAGCGGCTGAAACTGCCCCTCCAAGTAATTCTACCAAAATATCGAGCCAGAAAGCTTTGCAAGAAGACAGAGGAGCCGTTTTGCAAAATCCAGTGATGGAAAGGCCAGCCACTGGCCATCTTCCTCCGGCTTTTGATGATGTCATCCATGTTATACGGCATAGTAGTTTCCGTGTTGGGAGTGAACAACCAGTTAAGGAAGCTATGGAGATGGGAGTTCAAAATGTGGATGTTGGTAAATTTATTAATGTGGTTAGGGATGATTTAGAAATGAGAAACATGACCAATCCTGCGAGCCTTAGATCTTCGAGTAGCTCTGAAGCTATGAGCTTGAAGTCGAATACTTCTGAACATTTAGAGACGAGAAACTTGAACTCTCCTCCAGCCGTCAAATTTTCAAGCTGTTCTGATGCTTTGAGCTTGAAGTCAAATATTTCTGATCATTCCAGTGTTAAGGAACTAGATATGAGAAACCCTGTTTCCCCAGTTTCAAAATCTGATTCCACTGAGTTGTCTAAACATAACCCTCCACTGGCAGAAGAGGAAACACCAGCCAAGGAAACTTTGGATGTTAAATCTTTTAGGCAGAGAGCAGATGCCCTTGAAGGACTGTTAGAATTGTCTGCAGAGTTGCTGCAGCAAAATAGATTGGAGGAACTTGCGGTTGTTCTAAAGCCCTTTGGGAGGGACAAGGTGTCCCCAAGGGAGACGGCCATTTGGTTAGCCAAGAGTCTAAAAGGAATGATGATTGAAGACATTGCAGGACGGTCTTCATGA 3141 0.4314 MESRMDQYEIMEQIGRGAFGAAILVHHKAEKKKYVLKKIRLARQTERCRRSAHQEMALIARIQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGVYFPEEKLCKWVTQLLLAVEYLHSNFVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDMGGLISKINRSSIGPLPSCYSPSLKILIKGMLRKNPEHRPTASEVLKHPYLQPYVDQYRPSFSPPSACSLEKPISTARDSRRRMAESQNSCSSSSDRDSLISNERSVSSAVPKCDDKGTETDLASIDDEDGSEHHVPSEEENGSRTGNVKADQQELMKPSQIEKRSNVESKQPKTIKNIMMALKEGKVRVNSSPMRGNRIKAGGTSVQKANTETLPKLPKSAAVVPGSKSNLESPRSAPEKATPESGKRIQGSNPLKHLSPVVESSVKIKPRNDGTPSSAPTKQAEGDGVPPKPRLRTPPSLLRRPSFVGRVRQAGLDVPNGTSDTAKLGLNIVPQEPEKNPPQLPNGHVPHNFSETTREPQKPFERGSKGVQTDSSNSVSSSASIQGFELSDDATIFIDMREQTLPDHESVTHNGSVEPCSHISSTATYSHSQMTINMTSEASETTLNLRDTTASNERVGLNLTPHHPIPDSKETSASEDCFSINQTSISATYGCHNTSVSLPVEASEQVKDLQNTAKVTSSESLELPHTNSGEKFVCEEVAPVSNPNNRPNVVGQPKLMCVSTGDDKFTVRERLSSAAETAPPSNSTKISSQKALQEDRGAVLQNPVMERPATGHLPPAFDDVIHVIRHSSFRVGSEQPVKEAMEMGVQNVDVGKFINVVRDDLEMRNMTNPASLRSSSSSEAMSLKSNTSEHLETRNLNSPPAVKFSSCSDALSLKSNISDHSSVKELDMRNPVSPVSKSDSTELSKHNPPLAEEETPAKETLDVKSFRQRADALEGLLELSAELLQQNRLEELAVVLKPFGRDKVSPRETAIWLAKSLKGMMIEDIAGRSS 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01131 1046 SUPERFAMILY Protein kinase-like (PK-like) 4 315 IPR011009 -
Bach13g01131 1046 MobiDBLite consensus disorder prediction 353 367 - -
Bach13g01131 1046 MobiDBLite consensus disorder prediction 297 320 - -
Bach13g01131 1046 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Bach13g01131 1046 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Bach13g01131 1046 MobiDBLite consensus disorder prediction 580 595 - -
Bach13g01131 1046 MobiDBLite consensus disorder prediction 938 973 - -
Bach13g01131 1046 Gene3D Transferase(Phosphotransferase) domain 1 90 333 - -
Bach13g01131 1046 MobiDBLite consensus disorder prediction 545 595 - -
Bach13g01131 1046 CDD STKc_Nek 7 262 - -
Bach13g01131 1046 MobiDBLite consensus disorder prediction 368 382 - -
Bach13g01131 1046 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 5 994 - -
Bach13g01131 1046 FunFam Serine/threonine-protein kinase Nek5 90 335 - -
Bach13g01131 1046 SMART serkin_6 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g01131 1046 MobiDBLite consensus disorder prediction 273 520 - -
Bach13g01131 1046 Pfam Protein kinase domain 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g01131 1046 MobiDBLite consensus disorder prediction 883 917 - -
Bach13g01131 1046 ProSiteProfiles Protein kinase domain profile. 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g01131 1046 FunFam Serine/threonine-protein kinase Nek2 5 87 - -
Bach13g01131 1046 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01131 Bach-Chr13 15831875 15837312 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01131 14 263 MAP Kinase Kinase Kinase AT1G53570 31.765 2.21e-36 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Bach13g01131 Pkinase 1.1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01131 K08857 - gmx:100784761 1345.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01131 13 15831875 15837312 Bach13g01131 13 15831875 15837312 ECH