Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01121 ATGGCTGGAATTGATGTTCCTCAATATTTTGTTTGTCCCATCTCGCTTCAGATCATGAAGGACCCTGTGACGGCAGTGACAGGCATAACATACGACAGAGAAACCATAGAGCAGTGGTTGATGACAGCCAAACACTGCACCTGCCCTGTCACGAAGCAGCCATTGACAAGACACTCGGACTTGACCCCAAATCACACTCTGCGAAGGATAATCCAAGATTGGTGCTTGGGGAACGGCGTTGATCGGATACCAACTCCGAAACCCCCTCTCAACAAGACCCACTTTCAGAAACTCATCAGAAATCTAGAAGTTCCTCATTTGCATCAAAGCGTGTTAGAGAAAATGCATGCTTTGGCCGCAGAGAACGAGAGGAACAGAAGGTACATGGGGGAAGCTGGTGTTGCCAGCGCTATGGTTCCCATAATTATAAAGAGTTTCAAGCAAGGCAAGACTTCATGTCTTGAAGAAGCTTTGATAATCCTTCGTCTTCTTTGGAATGGTCCAACCTTGAAGCCTCTCATCAATGAAAATTTGGATCTCATCAACTCCTTGACCGGGATTTTGCATCATCACGTGGATAACAACGTCAAATTAGTTAACGAAGCAATGCCCATCTTGAACTCAGCTATCGAAATCTCAAATTCAACCCTCTTAGGCCACTTGAAGCTTGAATTCTTCAAAGAAATCACAAGGGTACTGAGAAGCAAAGCAGTCTCTCAACAAGCTGTCAAATCTGCTTTGCATGCATTAATAGAAACTTGCCCTTTAGGCAGAAATAGAATGAAGATTGTGGAAGCAGGTGCAGTTTTTGAACTAATCGATCTAGAACTCGAAAAACCCGAAAAGAATATAACTGAGCTAATATTTATCCTTTTAGCTCAGTTGTGTTCTTGTGCTAATGGTAGAGAACAGTTTCTTAAACACGCAGCAAGCATCGCAGTGTTTTCTAAAAGGATCTTAAGAGTTTCCCCTACAACAGACGACAGAGCGGTTCATACACTTTCCTTGATAGCTAAGTATTCAGCATCTATGAATTTCGTTTCAGAGATGTTGAGGGTTGGTGCTGTGTCAAAGCTTTGCATGGTGATGCAAGCGGATTGTGCTTCATATTTAAAAGAAATGGCAAGAGGGATTCTTAAGTTGCACTCCAAAACTTGGAATAATTCTCCATGTATTCAACTATATTTGTTAACGAGAGAACAAAGGTGA 1209 0.4227 MAGIDVPQYFVCPISLQIMKDPVTAVTGITYDRETIEQWLMTAKHCTCPVTKQPLTRHSDLTPNHTLRRIIQDWCLGNGVDRIPTPKPPLNKTHFQKLIRNLEVPHLHQSVLEKMHALAAENERNRRYMGEAGVASAMVPIIIKSFKQGKTSCLEEALIILRLLWNGPTLKPLINENLDLINSLTGILHHHVDNNVKLVNEAMPILNSAIEISNSTLLGHLKLEFFKEITRVLRSKAVSQQAVKSALHALIETCPLGRNRMKIVEAGAVFELIDLELEKPEKNITELIFILLAQLCSCANGREQFLKHAASIAVFSKRILRVSPTTDDRAVHTLSLIAKYSASMNFVSEMLRVGAVSKLCMVMQADCASYLKEMARGILKLHSKTWNNSPCIQLYLLTREQR 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01121 402 ProSiteProfiles U-box domain profile. 5 81 IPR003613 GO:0004842|GO:0016567
Bach13g01121 402 SMART Ubox_2 9 74 IPR003613 GO:0004842|GO:0016567
Bach13g01121 402 SUPERFAMILY ARM repeat 118 379 IPR016024 -
Bach13g01121 402 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 81 IPR013083 -
Bach13g01121 402 PANTHER WDSAM1 PROTEIN 4 393 IPR045185 GO:0061630
Bach13g01121 402 Pfam U-box domain 6 76 IPR003613 GO:0004842|GO:0016567
Bach13g01121 402 FunFam RING-type E3 ubiquitin transferase 6 80 - -
Bach13g01121 402 Gene3D - 93 392 IPR011989 -
Bach13g01121 402 SUPERFAMILY RING/U-box 4 83 - -
Bach13g01121 402 CDD RING-Ubox_WDSUB1-like 7 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01121 Bach-Chr13 15749804 15751012 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01121 4 392 U-box Gene Family AT2G35930 41.604 9.69e-101 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01121 - - gmx:100787419 552.747