Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01107 ATGTCCATGGACATGATGGCAACTGAACGTGTTTGTTATGTTCACTGCAATTTCTGCAACACCATTCTAGCGGTTAGCGTTCCATGCAGCAGTTTGCTCACCATAGTGACGGTTAGATGTGGGCATTGCGCCAATTTGCTATCAGTTAACATGGAAGCATCCCTTCAAACATTTCCTCCTCAAGACCCTCAGTCACAGAAACAACATCCAAGTTTTGAAGAATCAAGCTGCAGCAAGGACGTGGGATCATCTTCAAAAAGCAGCAAATTAGCTTCATTTGAGTCTGTAGAGCATGAGCAACCTAGGATTCCTGCCATTCGCCCCCCAGAGAAGAGACAACGTGTTCCTTCTGCTTATAACCGGTTCATTAAGGAGGAAATCCAAAGGATTAAGGCTAGTAATCCTGACATCAGCCATAGAGAGGCTTTCAGCACAGCAGCCAAAAATTGGGCACATTTCCCTCACATTCACTTTGGGTTAAAGCTGGATGGAAACAAGCAAACAAAGTTGGACCAGCTGGGGGAGGAAACTCATCAAAAGTCTAATGGATTTTACTGA 558 0.4462 MSMDMMATERVCYVHCNFCNTILAVSVPCSSLLTIVTVRCGHCANLLSVNMEASLQTFPPQDPQSQKQHPSFEESSCSKDVGSSSKSSKLASFESVEHEQPRIPAIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQTKLDQLGEETHQKSNGFY 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01107 185 MobiDBLite consensus disorder prediction 57 115 - -
Bach13g01107 185 FunFam Axial regulator YABBY 105 177 - -
Bach13g01107 185 MobiDBLite consensus disorder prediction 92 109 - -
Bach13g01107 185 Pfam YABBY protein 7 160 IPR006780 GO:0007275
Bach13g01107 185 CDD HMG-box_SF 114 150 - -
Bach13g01107 185 MobiDBLite consensus disorder prediction 57 91 - -
Bach13g01107 185 Gene3D High mobility group box domain 97 176 IPR036910 -
Bach13g01107 185 PANTHER PROTEIN YABBY 6-RELATED 1 170 IPR006780 GO:0007275
Bach13g01107 185 SUPERFAMILY HMG-box 102 153 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01107 Bach-Chr13 15622921 15628146 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01107 1 185 C2C2-YABBY Transcription Factor Family AT1G08465 67.368 3.44e-81 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Bach13g01107 YABBY 2.6e-73 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01107 K25796 - gmx:100785458 291.582