Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01105 CGCGATTAGTTATGGAGGGTTCGGGAATGGAAGAGCCTCAGAAGTCTGAGGCGCATTTGACTTCAGCTGCCGCATTTGTAGAGGGAGGAATTCAGGAAGCATGCGATGATACTTGCAGCATCTGTCTTGAAGCGTTCTGTGATAGTGATCCTTCAACGGTGACAAGTTGCAAGCATGAGTTTCATCTTCAATGCATTCTGGAATGGTGTCAGAGGAGCTCTCAGTGCCCTATGTGTTGGCAGCCCATCAGCCTGAAAGATCCAACTAGCCAGGAATTGCTTGAGGCGGTGGAAAGAGAAAGGAACTTTAGGTTCAACCCTTCTAGAAATGCTACAATATTCCACCATCCAACACTGGGGGATTTTGAATTACAGCATTTGCCAGTTGGTGCAAATGAGTCTGACCTTGAAGAGCGTATAATCCAGCACTTAGCTGCTGCTGCTGCAATGGGGCGAACACACCACATTTCTAGAAGGGAAGGCCAGAGAAACAGGTCATCAGCTCAAGGTCGCCCACATTTCTTGGTATTTTCAACTCATCCTAATTCGCCTCCTATGGTTCCTGCATCTTCCTCTCCTGCTCAGAGGGCGGAAGGTGAACCAACTCCTGCAATTGCTGTAGCCACTCTACCTCCAACTGGAGAAGAGTCGTCACAGCTGACTACAGTTCCTCCTGTTCAAGCAGAACAGGTTTCTGCTTCAGGATCTGGATCTACTGCTGTTGCTGCTGATCAGCATGGATCATCTTTCAGCAATAGTATATCTCCTAGTCATTCATCACCGAGTAATCAAGATAGAGCTGGGCCATCTGAATTTCAATCATTTTCAGAATCACTGAAGTCACGATTAAATGCAGTGTCAATGAGATATAAAGAGTCAATTTCTAAGAGCACAAGAGGATGGAAGGAGAGATGGTTCTCTCGCAACACCTCTATGTCTGATATGGGATCTGAAGTTAGAAGAGAGGATAATGCAGGGATTGCAACTGTATCAGATATGATGGAACGTCTGGAAACTAGAGACAGTAATAGAACTACTAGCGATTCTGCACCAACTAATTTAGAAGATAGTCCAATCCCAGGATCGAATGACCAGCAGTCATCAAACTCAGGTGACGGTCTTTTAAGAGACAATAATACAGAAACATTTTGTGCTGCAGGTTCTAGTTCAGTTTAA 1175 0.4519 MEGSGMEEPQKSEAHLTSAAAFVEGGIQEACDDTCSICLEAFCDSDPSTVTSCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLEAVERERNFRFNPSRNATIFHHPTLGDFELQHLPVGANESDLEERIIQHLAAAAAMGRTHHISRREGQRNRSSAQGRPHFLVFSTHPNSPPMVPASSSPAQRAEGEPTPAIAVATLPPTGEESSQLTTVPPVQAEQVSASGSGSTAVAADQHGSSFSNSISPSHSSPSNQDRAGPSEFQSFSESLKSRLNAVSMRYKESISKSTRGWKERWFSRNTSMSDMGSEVRREDNAGIATVSDMMERLETRDSNRTTSDSAPTNLEDSPIPGSNDQQSSNSGDGLLRDNNTETFCAAGSSSV 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01105 387 SUPERFAMILY RING/U-box 27 83 - -
Bach13g01105 387 ProSiteProfiles Zinc finger RING-type profile. 35 75 IPR001841 -
Bach13g01105 387 MobiDBLite consensus disorder prediction 208 272 - -
Bach13g01105 387 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 25 90 IPR013083 -
Bach13g01105 387 FunFam E3 ubiquitin-protein ligase RHF2A 6 109 - -
Bach13g01105 387 SMART ring_2 35 75 IPR001841 -
Bach13g01105 387 MobiDBLite consensus disorder prediction 330 387 - -
Bach13g01105 387 MobiDBLite consensus disorder prediction 170 272 - -
Bach13g01105 387 MobiDBLite consensus disorder prediction 340 387 - -
Bach13g01105 387 Pfam Ring finger domain 33 75 IPR001841 -
Bach13g01105 387 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 17 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01105 Bach-Chr13 15604672 15608507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01105 32 75 C3H Transcription Factor Family AT5G15790 50.000 8.82e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01105 K19043 - gmx:100780275 614.764