Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01089 ATGGACTGGACTAGAGGCCGCACTATTGGCCATGGCTCATCAGCCACCGTCTCCCTCGCTGCCTCTTGCCACTCCACCGACGTCTTTGCCGTCAAGTCAGCGGAGCTAACCCAGTCAGAGTTGTTACAGAGAGAGGAGAAAATTCTATCTTCTTTATGCTCTCCTCACATAGTCAGCTACAGGGGATTTGATATTAGCAGGGAGAATAACAGGGTTTTTTACAATCTGTTCATGGAGTATATGCCACTTGGCACGCTTATTCAATCAGTTCACCGGCACGGTGGCCGGCTGGAGGAGTTGGCGATCGCGTGCTATACACGGCAAGTTCTGCAAGGACTAGAGTATTTACATTCAATTGGGTTGGTACATTGTGACATCAAAGGTACCAATATCTTGATCAGTGAAGATGGTGCCAAAATTGCTGATTTTGGATGTGCTAAGTGGGTCAATGATGCGACGGCGGAGCAAATTAGTGGCACCCCCATGTTTATGGCGCCGGAGGTGGCGCGTGGGGAAGAGCAGGGATGTCCCTGTGATATCTGGGCACTTGGGTGCACCGTAATTGAAATGGCTACCGGGACTTCACCTTGGCCTAAGGTGGCGGACTCTGTTTCAGTTCTTTACAGAATTGCGTATTCAGGTGAAACGCCTGAGATTCCAGGTTTTCTATCAGAACAAGCAAAGGATTTCTTGAGGAATTTTCTAAAGAGGAATCCATGGGATAGGTGGACGGCCACTCAATTGCTCAACCATCCATTTCTCGAGGAATTCAATTCTAATGTTGCTAAGGAAATTCAAGAATCAAATTCAACATCATCGCCGACAAGTATTCTTGAGCAAGGCTTCTGGAATTGCTTAGAGGAATCACAGAGTTTGGGTAGTTTTAGTCATGCAAGTTTTGAAAATTCCCCTGCTGATAGAATCAGACGGCTAGCAGCGCGTTCAGGGGAACCCAGCTGGAGATGCGATGACGATTGGATCATAACCAGAGGGAATGAAGCAGAGGCTGCTCTTGAATCTGGTGTCATTTCTGGGTCAGAGACACCTTCAGCTTCAACAACTGACTCAATGCAAGAGTTAGAAGAAAGCAACGTCAAAACATTTAGTGCTAGTGGGTGTTTTAGTCATTTTCGTAATGATTATAGTAGGGAAATTTCCAATTTTGAGAGAAGCTTTGATCAGTTGCTACTGTCTTCAGTATCAAATTTTTTATAA 1215 0.4576 MDWTRGRTIGHGSSATVSLAASCHSTDVFAVKSAELTQSELLQREEKILSSLCSPHIVSYRGFDISRENNRVFYNLFMEYMPLGTLIQSVHRHGGRLEELAIACYTRQVLQGLEYLHSIGLVHCDIKGTNILISEDGAKIADFGCAKWVNDATAEQISGTPMFMAPEVARGEEQGCPCDIWALGCTVIEMATGTSPWPKVADSVSVLYRIAYSGETPEIPGFLSEQAKDFLRNFLKRNPWDRWTATQLLNHPFLEEFNSNVAKEIQESNSTSSPTSILEQGFWNCLEESQSLGSFSHASFENSPADRIRRLAARSGEPSWRCDDDWIITRGNEAEAALESGVISGSETPSASTTDSMQELEESNVKTFSASGCFSHFRNDYSREISNFERSFDQLLLSSVSNFL 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01089 404 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Bach13g01089 404 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Bach13g01089 404 SUPERFAMILY Protein kinase-like (PK-like) 2 276 IPR011009 -
Bach13g01089 404 Pfam Protein kinase domain 4 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g01089 404 CDD STKc_MAPKKK 2 254 - -
Bach13g01089 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Bach13g01089 404 SMART serkin_6 3 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g01089 404 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 291 - -
Bach13g01089 404 FunFam Mitogen-activated protein kinase kinase kinase 17 2 307 - -
Bach13g01089 404 Gene3D Transferase(Phosphotransferase) domain 1 2 307 - -
Bach13g01089 404 ProSiteProfiles Protein kinase domain profile. 3 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01089 Bach-Chr13 15514762 15515976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01089 1 347 MAP Kinase Kinase Kinase AT2G32510 50.275 1.70e-115 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bach13g01089 Pkinase 3.7e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01089 K20716 - qsa:O6P43_000561 482.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01089 13 15514762 15515976 Bach9g00387 9 2800738 2801982 BWGD
Bach13g01089 13 15514762 15515976 Bach7g01220 7 22633884 22635170 ECH
Bach13g01089 13 15514762 15515976 Bach13g01089 13 15514762 15515976 ECH