Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01077 ATGAACGACCTCCTTAAGGATTCATTCGTTAGTGAGGCTGATGGTCAGCCTTCTAGGCAAAATGATATTGAGATGGGAATGCAGGTTCCAAGGAGCAGTTCTGATATGGGAATGGAAGCTTTTAATAAGCAGATTCAAGAAGCTGAAAAACAGGTTGATAAGCTTTCTGAGCTACTTAGAAAACTGAATGATGCTAATGAGGAGTCCAAAGCTGTTACAAAAGCATCTGCCATGAAAGCTATCAAGAAGAAGATGGAGAAAGATATTGATGAAGTTGGAAAAATTGCACGTAATGTCAAAGCAAAAATTGAAGCTATAAACAAAGATAACCTAGCTAATCGACAAAAGCCTGGTTGTGAGAAGGGAACTGGTATTGATAGAGCAAGGATGAATATGACAAATTCCTTGACAAAAAAGTTTAAGGATCTAATGACAGAGTTTCAGACTCTTAGACAAAGAATGCAAGATGAATATCGTGAGGTTGTGGAAAGAAGAGTTATTACAGTTACGGGAACTAGGCCAGATGATGAGACAATTGACAACCTGATAGAAACTGGAAACAGTGAGCAAATCTTCCAGAAGGCAATTCTAGAAATGGGCCGAGGACAGGTGTTAAACACAGTGGAAGAAATTCAAGAGAGACACGATGCTGTGAAGGAAATAGAAAAAAAGCTTCTTGATTTACATCAGATTTACCTAGACATGGCTGTCTTAGTTGATGCTCAAGGAGAAATTTTAGATAACATTGAAAGTCAGGTTAACAATGCAGTCGATCATGTCCAGAGAGGGACAACTGCACTTCAAACTGCTAAGAAACACCAGAAGAGTTCCCGAAAATGGATGTGCATTGCCATCATTATACTTTTGCTAATAGTAGCTGTAGTAGTTGTTGGTGTTCTTCGTCCTTGGAAGAATAGCTAAGCTGCTTGAGTCTACCCCTTTGCTTCTTTGTCCATGTAGAAATAGTAACTTACGAGCATGTTTGGAAAGAGGTTGCAGGCGCTGATGCATGTGCGTCAGCGGCGCATGCTGTTCTAGTGCAGGGTTTTCTTTTATTTTCTTTGTTTGTTCTGATGCATGGGCTTGTCATGCTGGTGTGACTTACTTTTGATTGCTATATACTGGTGTGTCTCCTTATATGAATGTGAATGAAACTTGTACTCTTTTGAAGACTT 1175 0.3949 MNDLLKDSFVSEADGQPSRQNDIEMGMQVPRSSSDMGMEAFNKQIQEAEKQVDKLSELLRKLNDANEESKAVTKASAMKAIKKKMEKDIDEVGKIARNVKAKIEAINKDNLANRQKPGCEKGTGIDRARMNMTNSLTKKFKDLMTEFQTLRQRMQDEYREVVERRVITVTGTRPDDETIDNLIETGNSEQIFQKAILEMGRGQVLNTVEEIQERHDAVKEIEKKLLDLHQIYLDMAVLVDAQGEILDNIESQVNNAVDHVQRGTTALQTAKKHQKSSRKWMCIAIIILLLIVAVVVVGVLRPWKNS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01077 306 CDD SNARE_syntaxin1-like 207 269 - -
Bach13g01077 306 FunFam Syntaxin 132 201 301 - -
Bach13g01077 306 Gene3D - 34 162 - -
Bach13g01077 306 MobiDBLite consensus disorder prediction 1 34 - -
Bach13g01077 306 SMART SynN_4 33 159 IPR006011 GO:0016020
Bach13g01077 306 SUPERFAMILY t-snare proteins 35 263 IPR010989 GO:0016020|GO:0016192
Bach13g01077 306 PANTHER SYNTAXIN 38 288 IPR045242 -
Bach13g01077 306 Gene3D - 200 300 - -
Bach13g01077 306 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 208 270 IPR000727 -
Bach13g01077 306 SMART tSNARE_6 203 270 IPR000727 -
Bach13g01077 306 Pfam SNARE domain 244 296 IPR000727 -
Bach13g01077 306 MobiDBLite consensus disorder prediction 13 28 - -
Bach13g01077 306 CDD SynN 38 195 IPR006011 GO:0016020
Bach13g01077 306 FunFam Syntaxin 132 33 162 - -
Bach13g01077 306 Pfam Syntaxin 41 243 IPR006011 GO:0016020
Bach13g01077 306 Coils Coil 38 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01077 Bach-Chr13 15431798 15435121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01077 1 303 SNARE and Associated Proteins AT3G03800 62.706 1.24e-128 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01077 K08486 - gmx:100807404 493.041