Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01070 ATGACAATAATCGTGTCAACTGAGGGTTGCGAAAGTGTTCTCACCTGCTTGTCCCTATTTGGCCCTCTGGAAATTTCAGAGATTCTCAGCTCCGCCCTGCTTCTCGTTGAGGCTTTTGAAGTTTTCCGAATGGAATTCCTCTTGATTACGATGCACTCTCGCATGGTTATGATGAGGAAATTATCCCTCTTGGTATTTTTCCTGTGGATGCCAACGCAGGTTATGGGTAGGACAGGAAATACGACTGTAAACGCTACTGTTCCTTCAAGACCACCAAGTGTTGCGAGACTCGGAGTCCTGTTTACTCTTAATTCGTACATTGGAAGATCGGCTAAACCAGCAATTTTTGCTGCCTTGGATGATGTTAACTCTGATAAGAGCATTCTCCCTGACACAAAACTGGAAGTTATTTTACATGATACAAACTGCAGTGGGTTTCTTGGAACAATAGAAGCTCTGCAGTTTATGGAAGATGAAGTCATTGCTGCTATTGGTCCACAGTCCTCTGGAATAGCTCATGTCATCTCCCATGTGGTTAATGAACTCCATGTTCCCCTTCTGTCATTTGGGGCGACTGATCCTACTCTTGCAGCTCTGCAGTACCCATATTTCCTCCGTACTGTACACAGTGATTCTTTTCAAATGTATGGAATTGCAGACTTGGTTGACCATTATGGATGGAGGGAAGTCATTGCCATTTTTGTAGATGATGATAATGGCAGAAATGGGATTTCTGTGTTAGGTGATGCCCTAGCAAAGAAACGTGCCAAGGTCTCTTATAAGGCTGCCTTCAGTCCTGGAGCTACCTCAAATGATATCACTGACTTGTTAGCTGGAGTGAACTTAATGGAATCACGGGTCTACATTGTGCATGTCAATCCTGATACTGGTTTGAGAATTTTCTCTACTGCCAAGAGATTAGGGATGATGACTGCTGGCTATGTGTGGATTGCAACAGATTGGCTTTCTTCGGTGCTAGATTCGTCAGAAAGAGCTGACCCTGACACAATGAACCTCGTACAAGGGGTTGTTGCTCTTCGCCATCACACTCCTGATACTGATCTCAAAAAGAATTTTCTCTCTAGGCTGAAAAGCCGAAAAGACAAGGAGACTACAAGCTTCAATTCCTTTGCATTTTATGCATATGATTCTGTTTGGTTAGCTGCTCGCGCTTTCCATGTTTACTTGAATAATGGTGGAAATCTGTCTTTCACTAATGACCCTAGGTTGCGTGACTCAAATGGAAGCTCATTGCACTTATCAACACTTCGGGCTTTTGTAGGTGGCCCACAGTTTCTCCAGACAATCTTGGGTATGAACTTCACTGGTGTAAGTGGTCAAATTCAGTTTGGTATGGATAAGAATTTGGTTCATCCAGCATATGATATCCTAAACATTGGCGGATCTGGGTCACGTATTGTTGGTTATTGGACTAATTACTCTGGTCTGTCAGTTGAGACTCCTGAAATTTTATATAAGAAACCTCCTAACTCCTCGACAAGTAATCAAAAACTTTATAGTGTGATATGGCCAGGAGAGATTACTACTACACCTAGGGGATGGGTGTTCCCCTTCAATCAAAAGCCATTGCGCATAGCAGTGCCATACCGAGTAAGCTACCTGGAGTTTCTCTCCAAAGACAAGGACACAGGGGTAAAAGGTTATTGCATTGATATCTTTGAAGCAGCTGTAAAGTTGTTGCCTTATGCAGTTCCACTGAAATATATATTATATGGACATGGTGATAGAAATCCTGACTACAACAATCTTGTGAATGAGGTTGCACAAAATAACTTTGATGCAGCTGTTGGAGATGTCACAATTGTTACAAATAGGACGAGGATTGTGGATTTTACTCAACCTTACATGGAATCAGGGCTGGTCGTAGTTGTTCCCGTCAAGGAGATAAAGTCAAGCCCTTGGGCTTTCCTCAAGCCATTCACTGCTCAAATGTGGTGTGTCACTGGTGTTTTCTTTCTCTTTGTGGGAGCTGTTGTATGGATTCTTGAGCACCGGAGCAATCATGAGTTCCGTGGTCCACCAAGGAAACAACTAATAACAATATTTTGGTTTAGTTTCTCAACAATGTTTTTCTCACACAGGGAGAACACTGTGAGTACTCTCGGACGATTGGTGCTAATCATATGGCTTTTTGTGGTGTTAATTATCAATTCAAGCTACACAGCTAGTTTGACATCCATCCTCACAGTGCAGCAACTGACATCACAAATTGAAGGAATTGACAGCCTGATATCAAGCACTCAACCGATTGGAGTTCAAGATGGGTCATTCGCGAGGAAGTATCTGATAAATGAGCTCAATATAGCTGAGTCTAGGATTGTTACGTTGAAAAACCAGCAAGAATATATTGATGCCTTTCGACGTGGACCAAGAGATGGAGGGGTAGTAGCTATTGTCGATGAGCTTCCCTACATTCAGCTTTTGATGACCAACACCAACTGCAAGTTCAGAACTGTAGGACAGGAGTTTACTAAAAGTGGATGGGGATTTGCATTTCAGAGGGACTCTCCCCTTGCTGTTGACTTGTCAACCGCCATTCTCCAACTCTCTGAGAATGGTGACCTGCAGAAGATCCATGACAAATGGCTGAATAAAAATGATTGTACTGCACAACTCAGTGATATTGATTCAAACCAACTATCTCTCAAGAGCTTCTGGGGGCTCTTCCTTGTTTGCGGGATAGCATGTGTCCTTGCTTTGATTGCCTTCTTTATCAAGGTGTTCTGTCAATACATGAAATTCATCCCGGAGGACGAGGTGGACAACGAGGAAGTCCCTTCAAACGGGGCCAGAAGAAGTATCCGAAGTTCTAGAAGCTTCAAGGGCATAATCAATTTTGCAGATAGAAAAGAAGCAGATATCAAGGAGTTTCTTCAGCGGCAGAAGAGGAAACGCAGCCGCAACAGCATGGATGACCAACCCAGTTCATCCCCTCCCTATTCTAAGTAA 2970 0.4313 MTIIVSTEGCESVLTCLSLFGPLEISEILSSALLLVEAFEVFRMEFLLITMHSRMVMMRKLSLLVFFLWMPTQVMGRTGNTTVNATVPSRPPSVARLGVLFTLNSYIGRSAKPAIFAALDDVNSDKSILPDTKLEVILHDTNCSGFLGTIEALQFMEDEVIAAIGPQSSGIAHVISHVVNELHVPLLSFGATDPTLAALQYPYFLRTVHSDSFQMYGIADLVDHYGWREVIAIFVDDDNGRNGISVLGDALAKKRAKVSYKAAFSPGATSNDITDLLAGVNLMESRVYIVHVNPDTGLRIFSTAKRLGMMTAGYVWIATDWLSSVLDSSERADPDTMNLVQGVVALRHHTPDTDLKKNFLSRLKSRKDKETTSFNSFAFYAYDSVWLAARAFHVYLNNGGNLSFTNDPRLRDSNGSSLHLSTLRAFVGGPQFLQTILGMNFTGVSGQIQFGMDKNLVHPAYDILNIGGSGSRIVGYWTNYSGLSVETPEILYKKPPNSSTSNQKLYSVIWPGEITTTPRGWVFPFNQKPLRIAVPYRVSYLEFLSKDKDTGVKGYCIDIFEAAVKLLPYAVPLKYILYGHGDRNPDYNNLVNEVAQNNFDAAVGDVTIVTNRTRIVDFTQPYMESGLVVVVPVKEIKSSPWAFLKPFTAQMWCVTGVFFLFVGAVVWILEHRSNHEFRGPPRKQLITIFWFSFSTMFFSHRENTVSTLGRLVLIIWLFVVLIINSSYTASLTSILTVQQLTSQIEGIDSLISSTQPIGVQDGSFARKYLINELNIAESRIVTLKNQQEYIDAFRRGPRDGGVVAIVDELPYIQLLMTNTNCKFRTVGQEFTKSGWGFAFQRDSPLAVDLSTAILQLSENGDLQKIHDKWLNKNDCTAQLSDIDSNQLSLKSFWGLFLVCGIACVLALIAFFIKVFCQYMKFIPEDEVDNEEVPSNGARRSIRSSRSFKGIINFADRKEADIKEFLQRQKRKRSRNSMDDQPSSSPPYSK 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01070 989 FunFam Glutamate receptor 210 367 - -
Bach13g01070 989 SUPERFAMILY Periplasmic binding protein-like II 506 872 - -
Bach13g01070 989 Gene3D - 524 640 - -
Bach13g01070 989 SMART GluR_14 531 872 IPR001320 GO:0015276|GO:0016020
Bach13g01070 989 PIRSF IGluLR_plant 55 987 IPR017103 -
Bach13g01070 989 Gene3D - 765 874 - -
Bach13g01070 989 Pfam Bacterial extracellular solute-binding proteins, family 3 543 871 IPR001638 -
Bach13g01070 989 FunFam Glutamate receptor 640 770 - -
Bach13g01070 989 FunFam Glutamate receptor 766 874 - -
Bach13g01070 989 FunFam Glutamate receptor 525 640 - -
Bach13g01070 989 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 97 948 IPR015683 -
Bach13g01070 989 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 381 393 - -
Bach13g01070 989 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 108 124 - -
Bach13g01070 989 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 168 196 - -
Bach13g01070 989 Pfam Ligand-gated ion channel 872 903 IPR001320 GO:0015276|GO:0016020
Bach13g01070 989 CDD GluR_Plant 528 870 - -
Bach13g01070 989 Gene3D - 210 483 - -
Bach13g01070 989 CDD PBP1_GABAb_receptor_plant 96 485 IPR044440 -
Bach13g01070 989 MobiDBLite consensus disorder prediction 966 989 - -
Bach13g01070 989 Gene3D - 114 458 - -
Bach13g01070 989 Gene3D - 641 764 - -
Bach13g01070 989 SUPERFAMILY Periplasmic binding protein-like I 90 522 IPR028082 -
Bach13g01070 989 Pfam Receptor family ligand binding region 112 467 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01070 Bach-Chr13 15393633 15398720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01070 92 837 Ion Channels AT1G05200 68.139 0.0 1095
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01070 K05387 - qsa:O6P43_028681 1415.21