Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01061 ATGAAACCTCTGTGTGAGTTTTGTGGTGTGGCAAGAGCTGTGGTTTACTGCAAATCGGATTCTGCCCCTCTTTGCTTGAATTGCGATGGCTGTGTGCATTCTGCCAATTCTTTGTCACGCAGGCATCCCCGTTCGCTCCTGTGTGATAAGTGCAATTTTCAGCCCGCAATTGTCCGCTGCATGGATGATAAAATGTCTCTTTGTCAAGGCTGTGACTGGAACCGAAATGCCTGTTCCGTAATGGGACACCGGCGCCAGACACTGACTTGTTATACGGGTTGTCCCACTTTGTCTGAATTGTCTGGGATATGGTCTTCTGTTATTGATATTTCTTCTGTGGATGGTTTTGATAATGCTTGGGGATCAGTCGATGCATTACCTAAAATTGGCAGCTGCTCTACTAAGTGTTTGGAGGAACCGAATAATGATGGCTCTTTTGGTTTGGTGACTGGCAAGTTGAATGATATAGAACCATCTGCTAAATATGAACCTTGGATGGAACGATCTCCTTTAATCCCACCACCAAATCCAAGTTACATGCCGTACTGCAGAGACCAACCATTATTATTTCCTCAAGAATCAAGCTTGCCAAAGATGCAGGAATGTCCTAATTTCAAGGATCTTGATGGTCTTTGTGAAAGTCTCAACCTGGATGATGTTCAATTAAATTTTGAAAGTAGTGATGAAATATTTGGCTGCTCTCAAGGTGCCACCAGATATCAGCTTGAGGATGGAGGAATGGACTGTCTCTTAATGGAAAAGAACATATCAGTTACAGAATCTAATGTTCTTCCTGAGAATGCCGTGGAGGCATCATCATCAGTTCAACAAGACTGTGTGCCTTTCCAGTCATCCAGGGCTGGTGGGTCAGCTAGTGTGATGCAGGCCAACAATGGCAATGCAAATTGTGTACTTATGAATCCTAGCTGTAACAGAAACATCAATCTGGAATTTCCTCTGGGTCAAGTTCATTCAAGCTTATCACTTTCATTATCTAACATCACTGGTGAAAGTAGTGCCACTGATTATCAAGATTGTGGTTTATCACCTGTATTTCTGAGAGGTGATACCCCGTGGGAATCAAATTTGGAGCCTACATACCCACAAGCTAGGGACAGAGCTAAAATGAGGTACAATGAGAAAAAGAAAACTCGAACGTTTGGTAAACAAATAAGATATGCTTCTCGCAAAGTCCGTGCTGATACCAGAAAACGCGTGAAAGGTAGATTTGTGAAAGCAGGTGAAGCATATGATTATGATCCTCTGGTGATGAGGAACTTCTAA 1284 0.4283 MKPLCEFCGVARAVVYCKSDSAPLCLNCDGCVHSANSLSRRHPRSLLCDKCNFQPAIVRCMDDKMSLCQGCDWNRNACSVMGHRRQTLTCYTGCPTLSELSGIWSSVIDISSVDGFDNAWGSVDALPKIGSCSTKCLEEPNNDGSFGLVTGKLNDIEPSAKYEPWMERSPLIPPPNPSYMPYCRDQPLLFPQESSLPKMQECPNFKDLDGLCESLNLDDVQLNFESSDEIFGCSQGATRYQLEDGGMDCLLMEKNISVTESNVLPENAVEASSSVQQDCVPFQSSRAGGSASVMQANNGNANCVLMNPSCNRNINLEFPLGQVHSSLSLSLSNITGESSATDYQDCGLSPVFLRGDTPWESNLEPTYPQARDRAKMRYNEKKKTRTFGKQIRYASRKVRADTRKRVKGRFVKAGEAYDYDPLVMRNF 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01061 427 ProSiteProfiles CCT domain profile. 371 413 IPR010402 GO:0005515
Bach13g01061 427 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bach13g01061 427 SMART bboxneu5 1 47 IPR000315 GO:0008270
Bach13g01061 427 Pfam CCT motif 371 413 IPR010402 GO:0005515
Bach13g01061 427 CDD Bbox1_BBX-like 4 47 - -
Bach13g01061 427 ProSiteProfiles Zinc finger B-box type profile. 43 88 IPR000315 GO:0008270
Bach13g01061 427 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01061 Bach-Chr13 15305376 15307478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01061 1 421 C2C2-CO-like Transcription Factor Family AT3G21880 41.570 1.89e-98 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Bach13g01061 CCT 5.5e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01061 - - gmx:100804738 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01061 13 15305376 15307478 Bach13g01061 13 15305376 15307478 ECH