LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach13g01054	ATGGAATTGATAAGACGCAGTTATGCGATTTTTTTTGCCATTTTCCTTTGCGCGTTGACCAAAGGAGGCTCAGAGGGAAAGAGGTGGAAGCCAGAGGAGTTTGTTAGAGATAGGAGTGGTTTTTCATCGTCGCTTGAAACAGAAGGAAAGGTAGAGCAGGTGTGGGCACATTGTAGGAAAGAACTTATAGGGAGGAACAATGAGGGTGAAGATTTTAACACGCATCGATTGGAAAGAAGTGACATGACATCTGTACTTTTACTAGACAAGAATGCACATATATCAACTGAACTTCTGCCTCCCTATATGAAACAAAACCTTTTGAATTGCATAAGAAAGACAACTCTTTCTATTCCTGTTTCTGAAGACAAGGAAGATTCCAGAGAATGGTTGACGAAGAAGTTTGGGTCACAATTTGAATTGTGTAGTAGTCGTAGAAGAGATTTGGTCGCTGAGTCACCAGATAATCAGATGGCTCCAAACCCTGATCCAGGACCTGCAAAAGCAACTCCAACTCATGGTCCATCACTGGCCAGTTCAACTCATGATTTGGCGAAGCATTTTGGGTCACATTTTGAATCGCCTAGTAGTCGTAGAAGAGATTTGGTTGCTGAGTCACCTGATAATCAGATGGCTCCAAGCCCTGCTCCAGGGCCGTCAGAAGCAACTCCAACTCATGGTTCCTCACCGGCTAGTTCAACTCATGATCCATCACCGGCCAGTTCACCACCCAAAAGGAAGGCCCCTGCAGATGATCCACACAAGTACAGTTCGTTTCCACCACCTCCGCCTTCTAAGAGTCGTCCACCAATTCAAGATGCTCCTTCACCTCCCGAGCCGGATCACAGTCCAGCGAAAACAATATTTATTGTTGCTGTTTCTGTAGCTTCAGCAGGATTTTTGACCTTGATAGTCCTTCTCTTATGCTGGCCTAAGGATAATAGCAACAGTGTAGATCCAAAAGTGGAGCGAAAAGACGAAAGCCCTCTACTTACATCATCGTTGAGTGATTTTTCTGCTGGTTCAGAAAAGTCTACTACTTTGGGGAATTCTGATAAGAAAGAACCTGGTATTAATGATGAAAAGATCCCTACTGCTGTTAGCCATTTGTCCATAAAGACTGAAGATTCCAATACCTCAGTGACCCAGAATAAATCGTCAGAAGGTATGGGACAAGAATCAGCTCTTCCTTTAAAACCCCCTTCACCAAGGTCAGCTCCTGCATCCCCTGCGCCACCACAGCCACCACCTGTTCCTGCTCCTCGCCCACCACCACCTCCAAGACCAAGAGGTGCCCAACCTCCCCCTGCTCCTCCAAGACCATTGGCTACTAAAAAAAATCAACCTTCACCTCTTGGACCACTGCATCAGGAGCAGGGCGGTTCTAGTGAAGTCCGTGAATCTGATGCTCCGAAACCCAAATTAAAGCCATTCTTTTGGGATAAGGTTAATGCAAAACCTGGTCAAGAAATGGTCTGGAATGAGATCATTGCAGGATCATTCCAGTTCAATGAGGAAATGATAGAGTCTTTGTTTGGAACCACCAACCAGAACAAAAATGAACGGAGGAAAGATTCCCCATCTCTGGAACCTTCAGTCCAGTACATTCAGATTATCGATCCTAGAAAAGCACAGAATCTATCAATTCTTTTACGAGCTCTGAATGTGACAACAGAAGAAGTTATGGATGCTCTTAAAGAAGGTAATGAGATTCCTCTAGAGCTCATCCAGACGTTATTGAAGATGGCTCCAACGACAGAAGAAGAACTGAAGCTTAGGGTGTTCACAGGCGAACTTTCTCAACTTGGCCCCGCAGAGAGGTTTCTCAAGGTCATGGTTGACATTCCATTCGCCTTTAAACGACTAGAGTCTCTGATGTTCATGATTTCCCTTCCAGAAGAGATCTCAAGCGTTAAGGAGTCCTTTGCAACACTGGAGGTTGCTTGTGAAGAACTCAGGAAAAGCAGGCTATTCTTGAAACTATTAGAAGCAGTTCTCAAAACAGGCAATCGCATGAATGACGGCACATATCGTGGTGGTGCTCAAGCATTTAGGCTTGACACTCTCTTGAAACTGTCTGATGTGAAAGGAACCGATGGCAAGACAACACTATTACACTTTGTGGTTCAGGAGATTATACGTTCTGAGGGCATTAGAGCTGTGCGTGCAGCAAAGGAGAGCCAAAGCCTGTCTAGTGTGAAAACAGAGGACTTGGAGAAGGATGGCTCTGAGGAATCAGAAGAGCACTACCGCAGCCTTGGTCTACAGGTGGTATCAGGTTTAAGTAGTGAGTTGCAAGATGTCAAAAAGGCAGCATTCATAGATGGTGATTCGTTAACAGCTTCAGTATCAAACCTTGGCCAGTCATTGGTAAAGGCAAAAAATTTCCTCAACACAGATTTGAAGGATCTTGACGAAGACAGTGAATTCCGGGCTTCACTTGCTAGTTTCGTGGAGAAAACAGAAGGAGATGCGACGTGGCTACTGCAGGAAGAGAAGAGGATAATGGCTCTGGTAAAGAACACCGGAGATTATTTCCACGGGACAGCAGGAAAGGATTCAGGGTTGCGCTTGTTTGTGATAGTTCGTGATTTCTTGATAATATTGGATAAGGTGTGTAAAGAAGTGAAAGATACAACAGCGGCAGCAGCAACAACGAAGCCAAACGTTTCAAAGAAAGATGCTCAATCCTCAACAGCTTCTTCAGATACACACCAGACAGATGCTCCATCCTCGACAACTTCTTCAGACACTCACCAGACAGACGCTCCATCCTCGACAGCTTCTCCAGACACTCGTCAGACACGTTCCGATATTCACAGGCGACTATTTCCGGCAATTGCAGAGCGGAGAGTGCACGATTCCAGTTCCGATGAGGATGATGATGATGATGATGATTAG	2901	0.4516	MELIRRSYAIFFAIFLCALTKGGSEGKRWKPEEFVRDRSGFSSSLETEGKVEQVWAHCRKELIGRNNEGEDFNTHRLERSDMTSVLLLDKNAHISTELLPPYMKQNLLNCIRKTTLSIPVSEDKEDSREWLTKKFGSQFELCSSRRRDLVAESPDNQMAPNPDPGPAKATPTHGPSLASSTHDLAKHFGSHFESPSSRRRDLVAESPDNQMAPSPAPGPSEATPTHGSSPASSTHDPSPASSPPKRKAPADDPHKYSSFPPPPPSKSRPPIQDAPSPPEPDHSPAKTIFIVAVSVASAGFLTLIVLLLCWPKDNSNSVDPKVERKDESPLLTSSLSDFSAGSEKSTTLGNSDKKEPGINDEKIPTAVSHLSIKTEDSNTSVTQNKSSEGMGQESALPLKPPSPRSAPASPAPPQPPPVPAPRPPPPPRPRGAQPPPAPPRPLATKKNQPSPLGPLHQEQGGSSEVRESDAPKPKLKPFFWDKVNAKPGQEMVWNEIIAGSFQFNEEMIESLFGTTNQNKNERRKDSPSLEPSVQYIQIIDPRKAQNLSILLRALNVTTEEVMDALKEGNEIPLELIQTLLKMAPTTEEELKLRVFTGELSQLGPAERFLKVMVDIPFAFKRLESLMFMISLPEEISSVKESFATLEVACEELRKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFRLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIRAVRAAKESQSLSSVKTEDLEKDGSEESEEHYRSLGLQVVSGLSSELQDVKKAAFIDGDSLTASVSNLGQSLVKAKNFLNTDLKDLDEDSEFRASLASFVEKTEGDATWLLQEEKRIMALVKNTGDYFHGTAGKDSGLRLFVIVRDFLIILDKVCKEVKDTTAAAATTKPNVSKKDAQSSTASSDTHQTDAPSSTTSSDTHQTDAPSSTASPDTRQTRSDIHRRLFPAIAERRVHDSSSDEDDDDDDD	966

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach13g01054	966	MobiDBLite	consensus disorder prediction	186	205	-	-
	Bach13g01054	966	PANTHER	FORMIN-RELATED	275	945	IPR027643	GO:0003779\|GO:0030036\|GO:0045010\|GO:0051015
	Bach13g01054	966	MobiDBLite	consensus disorder prediction	331	347	-	-
	Bach13g01054	966	MobiDBLite	consensus disorder prediction	255	282	-	-
	Bach13g01054	966	SMART	it6_source	465	884	IPR015425	-
	Bach13g01054	966	MobiDBLite	consensus disorder prediction	221	240	-	-
	Bach13g01054	966	MobiDBLite	consensus disorder prediction	885	933	-	-
	Bach13g01054	966	MobiDBLite	consensus disorder prediction	314	474	-	-
	Bach13g01054	966	ProSiteProfiles	Formin homology-2 (FH2) domain profile.	465	895	IPR015425	-
	Bach13g01054	966	MobiDBLite	consensus disorder prediction	400	445	-	-
	Bach13g01054	966	MobiDBLite	consensus disorder prediction	885	966	-	-
	Bach13g01054	966	Pfam	Formin Homology 2 Domain	467	869	IPR015425	-
	Bach13g01054	966	Gene3D	Formin, FH2 domain	470	908	IPR042201	-
	Bach13g01054	966	SUPERFAMILY	Formin homology 2 domain (FH2 domain)	412	880	-	-
	Bach13g01054	966	MobiDBLite	consensus disorder prediction	152	282	-	-
	Bach13g01054	966	MobiDBLite	consensus disorder prediction	370	391	-	-
	Bach13g01054	966	MobiDBLite	consensus disorder prediction	934	957	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach13g01054	Bach-Chr13	15255499	15260070	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach13g01054	461	952	FH2 protein (formin) Gene Family	AT5G54650	63.030	0.0	594

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach13g01054	-		-	vvo:131606706	779.245