Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01034 ATGGTGAGAACTCCTTCACGAGATAAGAGTGGACTGAAGAAAGGAACATGGACGCCAGAAGAAGACATGAAGCTAATTGCTTATGTTACTAGGTATGGCTTCTGGAACTGGCGCCAACTTCCCAGATTTGCTGGTTTGGAAAGATGTGGAAAAAGTTGCAGACTGAGATGGATGAACTATCTAAGGCCAAACATCAAAAGAGGGGACTATACTCAAGAAGAAGAAGACATCATTATCAGACTTCATGCTGAACTGGGCAATAAATGGTCGGCAATTGCTGCTCACTTACCTGGGAGAACTGATAACGAAATAAAAAATCACTGGCACACCACTCTGAAGAAGAGGGCTCAACAAGAATCGGTTGTTCATGAAAAATCTCAAGTGCCCAAGTCAAGGGATCAGTCTCCAACTGAATCCAAAGAGGAAAATGATGCAATGGGAAACAATGGTCACTTCCAAAGTAATTCAGCTACTTCCCAGGTCACTGACTCTTCTTGGCCTGTGTCTCCATCGTCGAGTGAAATTTCCTGCATAACTAAAGAGATCACAGCTGATGGCAATGAAAATTTATGGAGGCTAGAAGATGAACTTGCTATTCTAGAAGCATACAAAGAACCTATGACCATGAGTGAAAATTTCTGGGCAGATCCACTTACAATTGATCACGTTGCATCCTATGTTCCAAGTGAAAATTTCTGGACGGAGCCTTTCCAAATTGAAACAACTCCCCAGATCCCTAATATCTGTCCATTGTCCCCGCAGCCATCTTCTAGTGGAAGTTTAGTTCTGGAAGAAGACTTTGCTTTTGTGGATGCATCAACAGAGCCTGTAATTGAGAATTTCTGGACAGATCCATATACGGCTGATGTTTCCCAAGTTCCAACTGATATATTCACTTCTTTGGTCACTGAATCAGAATCTTTAAGTCCATTGTTTGATGAACAACTGTGGAATCAAAATAACTTATATGAGGAATAA 978 0.4141 MVRTPSRDKSGLKKGTWTPEEDMKLIAYVTRYGFWNWRQLPRFAGLERCGKSCRLRWMNYLRPNIKRGDYTQEEEDIIIRLHAELGNKWSAIAAHLPGRTDNEIKNHWHTTLKKRAQQESVVHEKSQVPKSRDQSPTESKEENDAMGNNGHFQSNSATSQVTDSSWPVSPSSSEISCITKEITADGNENLWRLEDELAILEAYKEPMTMSENFWADPLTIDHVASYVPSENFWTEPFQIETTPQIPNICPLSPQPSSSGSLVLEEDFAFVDASTEPVIENFWTDPYTADVSQVPTDIFTSLVTESESLSPLFDEQLWNQNNLYEE 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01034 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bach13g01034 325 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bach13g01034 325 MobiDBLite consensus disorder prediction 114 140 - -
Bach13g01034 325 MobiDBLite consensus disorder prediction 114 172 - -
Bach13g01034 325 CDD SANT 16 61 IPR001005 -
Bach13g01034 325 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bach13g01034 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bach13g01034 325 CDD SANT 70 112 IPR001005 -
Bach13g01034 325 MobiDBLite consensus disorder prediction 141 172 - -
Bach13g01034 325 Gene3D - 6 67 - -
Bach13g01034 325 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 204 - -
Bach13g01034 325 SMART sant 13 63 IPR001005 -
Bach13g01034 325 SMART sant 66 114 IPR001005 -
Bach13g01034 325 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bach13g01034 325 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Bach13g01034 325 FunFam MYB-related transcription factor 13 66 - -
Bach13g01034 325 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bach13g01034 325 Gene3D - 69 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01034 Bach-Chr13 15102855 15104027 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01034 1 152 MYB Transcription Factor Family AT4G17785 56.051 1.61e-54 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach13g01034 Myb_DNA-binding 2.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01034 K09422 - gmx:100777107 320.087