Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01030 ATGGGAAGAGCACCTTGCTGTGACAAAAATGGACTCAGGAAAGGTCCATGGACACCCGAGGAAGATCTTAAGCTCATCAACTACATTCAAACTCATGGACCAGGCAATTGGCGAATCCTCCCCAAGGATGCTGGTCTGCAAAGATGTGGTAAGAGTTGCCGCCTTCGATGGAATAATTATCTGAGACCCGATATCAAGAGGGGAAGATTCTCTTTTGAAGAAGAAGAAGCGATCATTCAATTGCACAGTCTCGTGGGGAACAAGTGGTCGGCTATTGCTGCTCGCTTGCCTGGAAGAACCGACAATGAAATAAAGAATTACTGGAACACCCACATTAGGAAGAGGCTGCTTCGAATGGGGATTGATCCAGTAACTCATGCCCCAAGGCTTGACCTACTTGACATATCTTCAATTCTGAGCTCAGCTTTGATCAACCCATCGCTTCTAAACCTCCAAGGCTTATTGGGTGCCCAAGAATTGATGAACCCAGAATTGTTAAAGCTGACCAATACTCCCTTATGGTTGAACAATGAAAACCCAGATTTGGTTTCTCAGAATCTACAACAAATCCAAGCTGTGAATCCTCAAGTGCAAAACCAAATTGCCCCGAAAATGCAATTTAGTCAGTTTCAGACGCCGATTCCAGCCAATGCAGGAAATTTCTCGGGTGATTTGACAAATATGAGCTATTCAAATTCACAAGGGAATTCAATTCCCTCATATCTGGCTGAGAACCTCATGGCGCAGACAAGGCAACTTGATTTGCTGGTAAACCCAACCTTCGTCGAGCCACTTAACAATACAAACCAAAACTTGGGCTATGACTCCGTTCAATCTACGCCTTTGTCGAGCTCAACTCCACTGAATTCTTCGTCCACTTATGTGAATAGCAGCACAGAGGAGGAGAAAGACAGCTATTGCAGCAACTTGTTCAAGTTCGAAATTCCTGAGAGTCTGGATATTAGTGACTTCTTGTAA 978 0.4438 MGRAPCCDKNGLRKGPWTPEEDLKLINYIQTHGPGNWRILPKDAGLQRCGKSCRLRWNNYLRPDIKRGRFSFEEEEAIIQLHSLVGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHAPRLDLLDISSILSSALINPSLLNLQGLLGAQELMNPELLKLTNTPLWLNNENPDLVSQNLQQIQAVNPQVQNQIAPKMQFSQFQTPIPANAGNFSGDLTNMSYSNSQGNSIPSYLAENLMAQTRQLDLLVNPTFVEPLNNTNQNLGYDSVQSTPLSSSTPLNSSSTYVNSSTEEEKDSYCSNLFKFEIPESLDISDFL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01030 325 CDD SANT 69 112 IPR001005 -
Bach13g01030 325 Gene3D - 69 116 - -
Bach13g01030 325 CDD SANT 16 61 IPR001005 -
Bach13g01030 325 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 275 - -
Bach13g01030 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bach13g01030 325 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bach13g01030 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bach13g01030 325 FunFam MYB-related transcription factor 13 66 - -
Bach13g01030 325 Gene3D - 14 66 - -
Bach13g01030 325 SMART sant 66 114 IPR001005 -
Bach13g01030 325 SMART sant 13 63 IPR001005 -
Bach13g01030 325 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bach13g01030 325 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Bach13g01030 325 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bach13g01030 325 MobiDBLite consensus disorder prediction 277 299 - -
Bach13g01030 325 FunFam Transcription factor MYB39 69 130 - -
Bach13g01030 325 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01030 Bach-Chr13 15068329 15069495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01030 1 325 MYB Transcription Factor Family AT4G21440 48.919 3.14e-106 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach13g01030 Myb_DNA-binding 4.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01030 K09422 - pvy:116107108 410.994