Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00999 ATGAAAGGTGCTTTTCAGAATTCCCGTTTCTGTTGTAGTACGACACATGTAGGACTAAACCACAACACTTCAGTAGTGGTTCTCATCTCAACCATACACTTCATCGATCACTCTGTCGTATCTGCTCAATAATGCAAGAGCGCAGGGACGGAAATCTGGGTTGCTATTTTCAGCCACACGCTGCCTGCAACCTTATCGGCTCCGCTCCTTCCATGTGTCACACAGCTAGAGCTATCTTATCATATTTATTAATACTTATTTGCTTGCCAACCCATCTCCCAACACCAGTGCAGTAATTCACTGAATTGCTACTCTGCAAATAAAGGAGAAACTTCTGCTCTGAGCAGGGCAAAAGCACCGCTGACATATTTGGTTCTTTCTGTTTTTCTCTAGGAACATGGAGACTGTCTTTTCCAAGCACGACCAACCAACGGGATTCAAGGGTCTGAACAAGGAAGAGGAAGAAGATTTAATTGGGCAAGCCGAATGCTGGAAATACATGACAAGCTTCACTGATTCTGTGGCCATAAAAGCTGCTGTGGAGCTTGGCATTGCTGACATAATAGACCACCATAGCCAACCAATCTCCTTGCAAAAAATTCTGGACAACATTGCTGATGCACCCTCCCCAGATATCTCCTTCCTCCTCCGAATCATGAGAGTGCTCGTTCGCAGAAAGGTCTTCTCTGCACAGAAATCAGAAAGTGGAGAGACACTTTATGGCATCACTCCCACTTCAAAATGGCTCTTGCGTGACTCCAAGGTGAGTTTAGCTCCCATGCTGCTCTTGGAGAACCACCCTATTCATATTAATCCAGCTCATTTTGTTAGCGATGTTATCAGAGAAGGTACAAAAAATGGCACCCCCTTCTTCAGGTGCCATGGCTACGAGCAATTTGAGTTCACATCTCTGAACCCAGATTACAACAGGTTGTTCAATGAGGGCATGGCCTGCACAGCCAGGATTGTGTCAAAGGCTGTCATCGAAGGATACAGAGATGGATTCAACAAGATTGAATCATTGGTCGACGTTGGAGGTGGTATTGGAGGATCACTTTCTGAGATTGTCAGAGCATACCCACATCTCAAAGCTATCAACTTTGATTTGCCACATGTGGTTGCCACAGCACCCAAATACGATGGAATCACCCATGTTGGAGGAGACATGTTCGTCTCCATTCCCAAAGCTGATGCTATTTACATGAAGTGGATTCTGCATGACTGGAGTGACGAACACTGCGTGAAGATTTTGAAGAACTGCAGGAAGGCAATCCCTGAGAAGACTGGAAAAGTGATTATTGTGGATCATGTTCTGCAGCCCGAAGGGAATGGCCTATTTGATGACACAGGGTTTGCCTTTGACATGATGCTGCTTGCACACAACTCTGGTGGGAAAGAAAGAACTGAAGAAAACTGGAAATGGCTGTTTGCAGAAACTGGATTCCCTCGCTACAATATCATCAAGATCAAGGCTTTGCCTTGTATTATTGAGGCGTTTCCAATCTAGAAGGTTTTATATGCACTTCGCATTATTATGTGGCCCCAGGGTTCTGTATCAAATATAAAATAAAACACCCTCTAGCTCCAGTTGATGTTGATCTTGTATTTCTATGGGCTACAATCCATTATGTCGTAGTTGTAAGGATTAGGGTGGAAGTGTGGTGAAGTATGGTGAACCTTGTGCTCTTTTAGTCATTGTTAATGATCAGCGTGCAAC 1717 0.4438 METVFSKHDQPTGFKGLNKEEEEDLIGQAECWKYMTSFTDSVAIKAAVELGIADIIDHHSQPISLQKILDNIADAPSPDISFLLRIMRVLVRRKVFSAQKSESGETLYGITPTSKWLLRDSKVSLAPMLLLENHPIHINPAHFVSDVIREGTKNGTPFFRCHGYEQFEFTSLNPDYNRLFNEGMACTARIVSKAVIEGYRDGFNKIESLVDVGGGIGGSLSEIVRAYPHLKAINFDLPHVVATAPKYDGITHVGGDMFVSIPKADAIYMKWILHDWSDEHCVKILKNCRKAIPEKTGKVIIVDHVLQPEGNGLFDDTGFAFDMMLLAHNSGGKERTEENWKWLFAETGFPRYNIIKIKALPCIIEAFPI 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00999 369 SUPERFAMILY "Winged helix" DNA-binding domain 22 121 IPR036390 -
Bach13g00999 369 FunFam O-methyltransferase family protein 119 367 - -
Bach13g00999 369 Pfam Dimerisation domain 43 91 IPR012967 GO:0046983
Bach13g00999 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 366 IPR029063 -
Bach13g00999 369 PIRSF O-mtase 13 369 IPR016461 GO:0008168
Bach13g00999 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 32 368 IPR016461 GO:0008168
Bach13g00999 369 Pfam O-methyltransferase domain 145 349 IPR001077 GO:0008171
Bach13g00999 369 CDD AdoMet_MTases 209 306 - -
Bach13g00999 369 Gene3D Vaccinia Virus protein VP39 119 369 IPR029063 -
Bach13g00999 369 PANTHER O-METHYLTRANSFERASE 41 351 IPR016461 GO:0008168
Bach13g00999 369 Gene3D - 15 117 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00999 Bach-Chr13 14874260 14879043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00999 42 355 Monolignol Biosynthesis Gene Families AT5G54160 41.433 1.56e-79 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00999 K22588 - gmx:100812768 622.854