Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00995 ATGGCTGCGGCTAAGAACAGTAGCAAATCCAACAAGCGTGCCGATGACACTCAGAAGATTACCCAGATGGGAGAAAGCCAAGACTGGGGAATTGACAAGGGTAAGGATCTAGATTTTAGCTTTCAGAGGCGGCAATGGAAGCCAGTTTTTGATGAAGCTTCCGTGTCACATAGGCCTCTAAAGAAGATCCGGAGCCCAGAACGTCAAAACTCTAATCCATCATCCTCTGTTTCACTGCAACCTCCGTCTTCCTCATTTATCTCTGCAATCCCTCATACTACAGCCTCATCTTCCAATGTGTGTCCTCCTTCATCATCTTCTAGAATTGTGTTTCCTTTTGCCTTTGACGGGTCTCAACATCCTATGCAATTTCCCCACCAATTTGGGACCACAAATTTGCCCCTGTTTCGTCCACCAATTCAACCGACACAGCACAATCAGCAGCAACAGATGATATCTTTTGGTCCTCAGCAACAAAACATTATGTACCCGCAATTCCTTGTCCCAGATTCTGCCATGTCCCAGCAACAACATCACCAGCAGCAGCTTCTCCACTATTGGAGTGACGCGCTGAATCTAAGTCCTCGAGGAAGGATGATGATGATGAATAGGTTGGGGCCAGATGGCAGGCCGTTGTTTAGGCCTCCAGCACAGCCTTTAAATACTACTAAGCTGTACCGGGGAGTGAGACAACGCCATTGGGGAAAGTGGGTGGCCGAAATTCGTCTTCCTCGCAATAGAACTCGCCTCTGGCTAGGCACATTTGATACCGCAGAAGATGCTGCCTTAGCATATGATCGTGAAGCCTTTAAGTTGAGAGGTGAGAATGCAAGACTCAATTTTCCCGAGCTTTTCCTCAACAAGGATAAAGCAACATCAACTGCTCCAAATTCAGCTGCTTCTTCTCCCCCAACTCCGCATGAAGGTTCCACTTCCACGTCAAATCAGAACTCAAAGCAACCCGAGCCAGTTCAAGATGGCCTCAACATGCAGGCTATGAACACGGAGAGGATGCCTCCGCCGGCGATGCCACAGCAGGAAGAGCATACTGACAATGATTCGGGATTTGGGTCGAGTGACGTTACCGTGAGTGACGAAGTTCAGGCAACTGCTTCAGGTAATGAAACAGGGGAAGGCATTTCACCGTCGCAGGAACTACTTTGGAGCGAAATGGCAGCTTGGTTCAATGCAATTCCCGGAGGTTGGGGTCCCGGAAGCCCTGTGTGGGATGATTTGGACACCAACAATAATCTTCTCTTTCCGTCACAGCTCCCTTTTGTCAATCCAAATCAACATGAATTCAATGGTGCTGATGCTCAGAGACTAGATGATAACACAGGACCAGGTTCTTCAACTCCTTCTGCTTGTCCCATGAGGCCCTTCTTCTGGAAGGGTCAAGATTGA 1404 0.4843 MAAAKNSSKSNKRADDTQKITQMGESQDWGIDKGKDLDFSFQRRQWKPVFDEASVSHRPLKKIRSPERQNSNPSSSVSLQPPSSSFISAIPHTTASSSNVCPPSSSSRIVFPFAFDGSQHPMQFPHQFGTTNLPLFRPPIQPTQHNQQQQMISFGPQQQNIMYPQFLVPDSAMSQQQHHQQQLLHYWSDALNLSPRGRMMMMNRLGPDGRPLFRPPAQPLNTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAALAYDREAFKLRGENARLNFPELFLNKDKATSTAPNSAASSPPTPHEGSTSTSNQNSKQPEPVQDGLNMQAMNTERMPPPAMPQQEEHTDNDSGFGSSDVTVSDEVQATASGNETGEGISPSQELLWSEMAAWFNAIPGGWGPGSPVWDDLDTNNNLLFPSQLPFVNPNQHEFNGADAQRLDDNTGPGSSTPSACPMRPFFWKGQD 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00995 467 SUPERFAMILY DNA-binding domain 225 283 IPR016177 GO:0003677
Bach13g00995 467 Pfam AP2 domain 226 274 IPR001471 GO:0003700|GO:0006355
Bach13g00995 467 SMART rav1_2 225 288 IPR001471 GO:0003700|GO:0006355
Bach13g00995 467 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 9 412 - -
Bach13g00995 467 MobiDBLite consensus disorder prediction 431 467 - -
Bach13g00995 467 MobiDBLite consensus disorder prediction 291 360 - -
Bach13g00995 467 MobiDBLite consensus disorder prediction 1 34 - -
Bach13g00995 467 Gene3D AP2/ERF domain 225 283 IPR036955 GO:0003700|GO:0006355
Bach13g00995 467 MobiDBLite consensus disorder prediction 50 103 - -
Bach13g00995 467 CDD AP2 224 284 IPR001471 GO:0003700|GO:0006355
Bach13g00995 467 PRINTS Ethylene responsive element binding protein signature 226 237 IPR001471 GO:0003700|GO:0006355
Bach13g00995 467 PRINTS Ethylene responsive element binding protein signature 248 264 IPR001471 GO:0003700|GO:0006355
Bach13g00995 467 ProSiteProfiles AP2/ERF domain profile. 225 282 IPR001471 GO:0003700|GO:0006355
Bach13g00995 467 MobiDBLite consensus disorder prediction 50 65 - -
Bach13g00995 467 MobiDBLite consensus disorder prediction 66 103 - -
Bach13g00995 467 MobiDBLite consensus disorder prediction 291 332 - -
Bach13g00995 467 FunFam Ethylene-responsive transcription factor 2 224 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00995 Bach-Chr13 14848152 14849555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00995 1 411 AP2-EREBP Transcription Factor Family AT2G20880 40.385 3.35e-61 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach13g00995 AP2 3.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00995 - - qsa:O6P43_028790 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g00995 13 14848152 14849555 Bach13g00995 13 14848152 14849555 ECH