Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00983 CGCAGGGTTCCTTTCTCACCCGCTTACTACGGAAACTTGGTTATTTGAAGCTTTCTGAACTTCGTTAGAGCTTCCACCCCACAACACAAGTTCTTCACCAGCTAATTTATCTGTTCAATCATAACAACAAAACATGGACTTGGATCGGTACTTTGAGGAGGCTGTCCCCCAAACTGATCCTTTTGGAGAAGATAAATCCTTGGGAAAGTGGAATTCTGCCATAGATGCTGATTCAGATTCTGATAGAAATGGCTTTGACTGCAACATCTGTCTTGATAGTGTGCAAGACCCAGTGGTCACTCTCTGTGGCCATCTTTACTGCTGGCCTTGCATTTACAAGTGGCTTCATTTCCAAACCATCTCTTCAGAAAGCGAAGAGCAGCCAAGACCACAGTGCCCAGTTTGTAAATCACAAGTTTCTCAAACATCTCTTGTTCCATTATATGGCCGTGGCAGCACCAGTAACCCTTCTAAAGGCAAGGCCTCTCATGTAGGCATGGTTATACCACGAAGACCCCTTGGCCCAGCATGCCTTCTTGATTCATCAAGATCAACCAATACTCCCCAACCAGCTTCACAATTTTATCATCGCCATCATCCTTATCGTTCTCAACAATTCAACTCAGCAACCGGCAATTACCCTTCACCAATGCTTGGCACCGGCGGTCCATTAACAAATGCATTTGATACTACATCTGGAATCTTCGCTGAGATGATATACGCTAGGGTGTTTGGTGATCAAGTAACAAACGTATACGCTTACCCCGATTCATATCGTCTTGCCGGGAACAATAATCCAAGGGTCAGAAGGCACTTAATGCAAGCTGATAAGTCACTCAACAGAATCTGTTCCTTCCTGCTTTGTTGTGTAATTTTGTGTCTTCTGTTATTCTGAATGGACTTGGATCGGTACTTTGAGGAGGCTGTCCCCCAAACTGATCCTTTTGGAGAAGATAAATCCTTGGGAAAGTGGAATTCTGCCATAGATGCTGATTCAGATTCTGATAGAAATGGCTTTGACTGCAACATCTGTCTTGATAGTGTGCAAGACCCAGTGGTCACTCTCTGTGGCCATCTTTACTGCTGGCCTTGCATTTACAAGTGGCTTCATTTCCAAACCATCTCTTCAGAAAGCGAAGAGCAGCCAAGACCACAGTGCCCAGTTTGTAAATCACAAGTTTCTCAAACATCTCTTGTTCCATTATATGGCCGTGGCAGCACCAGTAACCCTTCTAAAGGCAAGGCCTCTCATGTAGGCATGGTTATACCACGAAGACCCCTTGGCCCAGCATGCCTTCTTGATTCATCAAGATCAACCAATACTCCCCAACCAGCTTCACAATTTTATCATCGCCATCATCCTTATCGTTCTCAACAATTCAACTCAGCAACCGGCAATTACCCTTCACCAATGCTTGGCACCGGCGGTCCATTAACAAATGCATTTGATACTACATCTGGAATCTTCGCTGAGATGATATACGCTAGGGTGTTTGGTGATCAAGTAACAAACGTATACGCTTACCCCGATTCATATCGTCTTGCCGGGAACAATAATCCAAGGGTCAGAAGGCACTTAATGCAAGCTGATAAGTCACTCAACAGAATCTGTTCCTTCCTGCTTTGTTGTGTAATTTTGTGTCTTCTGTTATTCTGAATACGATTCCATTTTCCTTTTAGTGTTATACATCACTGTATATAATATACACTGTAATGCGGATTCATATCAAGCAATGAGATATATGAAATAGCTTT 1755 0.4353 MDLDRYFEEAVPQTDPFGEDKSLGKWNSAIDADSDSDRNGFDCNICLDSVQDPVVTLCGHLYCWPCIYKWLHFQTISSESEEQPRPQCPVCKSQVSQTSLVPLYGRGSTSNPSKGKASHVGMVIPRRPLGPACLLDSSRSTNTPQPASQFYHRHHPYRSQQFNSATGNYPSPMLGTGGPLTNAFDTTSGIFAEMIYARVFGDQVTNVYAYPDSYRLAGNNNPRVRRHLMQADKSLNRICSFLLCCVILCLLLF 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00983 253 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 25 105 IPR013083 -
Bach13g00983 253 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 7 250 IPR045103 GO:0005783|GO:0006511|GO:0061630
Bach13g00983 253 Pfam Zinc finger, C3HC4 type (RING finger) 43 91 IPR018957 GO:0046872
Bach13g00983 253 ProSitePatterns Zinc finger RING-type signature. 58 67 IPR017907 -
Bach13g00983 253 CDD RING-HC_AtRMA-like 41 93 - -
Bach13g00983 253 SMART ring_2 43 91 IPR001841 -
Bach13g00983 253 SUPERFAMILY RING/U-box 37 97 - -
Bach13g00983 253 ProSiteProfiles Zinc finger RING-type profile. 43 92 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00983 Bach-Chr13 14805333 14807736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00983 30 253 C3H Transcription Factor Family AT4G28270 38.462 9.97e-44 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00983 K10666 - gmx:100785491 317.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g00983 13 14805333 14807736 Bach13g00983 13 14805333 14807736 ECH