Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00976 ATGGAACCCTTACTAAAAGGTGAAACCAGTAGCCGGAGGGAGCGCGCGGCGGGAATATTTCGTCGATCGGATGCACTCGCTTATGGCTCGCCATATCAGAAAGCAGCTGCACTTGTCGATCTGGCTGAAGATGGTGTTGGTCTACCGGAGCAGATTCTTGATTCATCAAACTTTCAAAATTCTGCTAGACTATATTTCATGTTCAGTAAATTTGATATCATCTGGTCCCTTAATTATTTTGCCTTGCTAGTTCTGAATTTCCTTGAGAAACCTTTGTGGTGCGCTAAGTCCACTACTTGTTCTTGCAACGATAGGGAGTATTTCTTTCTCGGACAGTTGCCATATCTAACTGGAGCAGAATCTCTCATTTATGAGGGAATAACTCTTCTTGTCCTAATCATACATACTTTCTTCCCAATATCATATGAAGGGTCCGGTATATATTGGAAAAATGCTGTTAATCAATTGAAGGTCTTCTGTCTATTAGTTCTAGTTGCAGATATGCTGGTTTATTCTCTATATTTGTCTCCAGTTGCTTTTGACTCCCCACCTTTCAGAATTGCACCTTATATCAGGGTTGTTCTTTTCATTCTGAATATTAGGGAACTACGTGCAAGCATTGTCATTTTAGCTGGAATGCTAAATACATACATAAACGTCTTGGCTTTAGGACTTCTGTTTCTTCTTTTTGCAAGTTGGGTAGCCTATGTGATGTTCGAAGATACACGACAGGGGAAAACATTATTCACTTCCTATGGTACCACACTGTACCAGATGTTTGTTTTATTTACCACATCCAATAATCCAGATGTCTGGATACCTGCATACAAGGCTTCGCGTTGGTATTGCTTATTTTTTGTTCTGTACGTGCTATTGGGGGTTTACTTTGTGACAAACTTAGTCCTTGCTGTTGTTTATGACAGTTTCAAGAGTGAGCTTGCAAAACAAGTTTCCGAGATGGATTTTATGAGACGAAATATGTTGGAGAAAGCTTTTATACTCTTAACTAATAATCCTGCTGGACATCTTAACAAGGATCAATGCATTAAGCTCTTTGAGGAGCTCAACAAGTACAGGACTTTGCCGAAAATGTCAAGGGAAGAATTTGGCTTGATATTTGATGAGCTGGATGATAGTCATGATGTAAAGATCAACAAGGATGAATTTGCTGATCTGTGCAATGCCATTGCACTAAAATTCCAGAAGGAGGACGTTTCATCTTACTTTGAGTATTTACAATTCTACGATTCACCTCTCTCCAAAAATTTGAAAGAATTTGTGCGGAGCCCCACGTTTGGATACATAGTGTCCTTCGTTCTTGTACTAAATTTGGTCGCCGTTATTATTGAGACAACGCTTGATATAGAAAATAATTCTGCACAAAAGGTGTGGCAAGAAGTGGAGTTTGTTTTTGGGTGGATATATGTAATAGAAATGGCTCTAAAAGTTTATTCATATGGATTCGAGAACTATTGGCGGGATGGTCAAAACCACTTTGATTTTTTGATCACATGGATAATCGTCATTGGAGAAACCATAACTTTTGTTTCACCTGATGAATTGACCTTTTTTACAAACGGAGAATGGATTCGTTACCTTCTTCTTGCAAGAATGCTTAGGTTGTTGAGGCTCCTAATGCATGTCCAGCGATGCCGAGCCTTTATTGCAACTTTCCTAACCCTCATACCAAGTTTGATGCCGTACCTAGGGACTATATTTTGTGTCTTGTGTGTTTATTGCTCTCTTGGTGTACAGATCTTTGGGGGAATTGTCAATGCTGGAAACCCCAAATTGGAATCAACAGATCTTGCTGATGATGATTATTTGCTTTTCAATTTTAATGATTACCCAAATGGAATGGTGACGCTTTTCAATTTGCTGGTCATGGGGAACTGGCAAGTGTGGATGCAGAGCTACAAGGAATTAACAGGCACTTCTTGGACCTATGCATATTTCATTAGCTTCTACATAATTACGGTGTTGCTTCTTTTGAATTTGGTTGTTGCTTTTGTCTTGGAAGCCTTCTTTGCTGAAATGCAGCTCGAGTCATCAGATAACTGTGAAGACAGTGACAAGAGTTGTGCCAAACAGAGTCTTCTAATCCATAGATTCGCCTCAAAAAACTCTGCTGGTTCTGGGCAGGAACCAGGGGAAAGAAATACGAACCTTTTATATGAATCTCTAGGGGTTAGCAGGTCCGGTCGAAGGGATTTCCATTCTCTGGGAAAAGCCATATTGACCTTGCTATGA 2250 0.3982 MEPLLKGETSSRRERAAGIFRRSDALAYGSPYQKAAALVDLAEDGVGLPEQILDSSNFQNSARLYFMFSKFDIIWSLNYFALLVLNFLEKPLWCAKSTTCSCNDREYFFLGQLPYLTGAESLIYEGITLLVLIIHTFFPISYEGSGIYWKNAVNQLKVFCLLVLVADMLVYSLYLSPVAFDSPPFRIAPYIRVVLFILNIRELRASIVILAGMLNTYINVLALGLLFLLFASWVAYVMFEDTRQGKTLFTSYGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLLGVYFVTNLVLAVVYDSFKSELAKQVSEMDFMRRNMLEKAFILLTNNPAGHLNKDQCIKLFEELNKYRTLPKMSREEFGLIFDELDDSHDVKINKDEFADLCNAIALKFQKEDVSSYFEYLQFYDSPLSKNLKEFVRSPTFGYIVSFVLVLNLVAVIIETTLDIENNSAQKVWQEVEFVFGWIYVIEMALKVYSYGFENYWRDGQNHFDFLITWIIVIGETITFVSPDELTFFTNGEWIRYLLLARMLRLLRLLMHVQRCRAFIATFLTLIPSLMPYLGTIFCVLCVYCSLGVQIFGGIVNAGNPKLESTDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTSWTYAYFISFYIITVLLLLNLVVAFVLEAFFAEMQLESSDNCEDSDKSCAKQSLLIHRFASKNSAGSGQEPGERNTNLLYESLGVSRSGRRDFHSLGKAILTLL 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00976 749 Pfam Ion transport protein 129 311 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bach13g00976 749 Pfam Ion transport protein 430 676 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bach13g00976 749 SUPERFAMILY Voltage-gated potassium channels 429 675 - -
Bach13g00976 749 Gene3D - 309 393 - -
Bach13g00976 749 Gene3D - 422 554 IPR027359 -
Bach13g00976 749 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 2 711 IPR044581 GO:0005245
Bach13g00976 749 Gene3D - 555 711 - -
Bach13g00976 749 Gene3D - 202 308 - -
Bach13g00976 749 FunFam Two pore calcium channel protein 1 422 554 - -
Bach13g00976 749 ProSiteProfiles EF-hand calcium-binding domain profile. 364 399 IPR002048 GO:0005509
Bach13g00976 749 SUPERFAMILY EF-hand 323 410 IPR011992 -
Bach13g00976 749 FunFam Two pore calcium channel protein 1 202 313 - -
Bach13g00976 749 FunFam Two pore calcium channel protein 1 555 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00976 Bach-Chr13 14765334 14777668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00976 21 729 Ion Channels AT4G03560 69.718 0.0 1048
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00976 K16900 - qsa:O6P43_028812 1113.21