LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach13g00972	AAAAAGAAGGATGATAGACGGAAGAGAGTGGAGTCTTTTGACTGATGAGCACACAGTCGGCAAAAGCCGTCCATCATAGATAATGCTCTTAAATTCATCAATACGCGTTGAACTTTCAGCCAGACCCAAGCCACACTGTCTTTGTTGTTAAAGCTTTTGATTCACCCCCACCCTTAATCCTAATTCATGAAGTTACTTTTTTATTTTTCCAATTCTTTGATTAGTTTGATGGTTTCTTGACTTACCCAAGTATTTATATCTTCAGAATCCGAGGCTTTGTTTTCCTGAATTTCCAGTTTTGAAGAAAAGTTTGCTTTTTTCCAAGTTTGAAGATTCTCGGCGAAGAGTTATTGTCAAAAAGTTTTTCGAAGTATTGGAGGAGGCATGGCTTGAATTTTTGGATTCATGGACAGTGATAAGATGATATGTTCATTAGTGGGTAGCTACTGCAACATGGGCTGCATATCTTCAAAAAGTGCAGCTGTGGAAGACAGCCGGGAAGGATTGGCAAAGAAATTGTCATCGTCTAGCAAAAGGTCATCGGGGCTGAATGTTTCACGACTGAATTCCTCGGCGAGGGATGAAGGACTCCGGGAGAAAGCTAAATTAGATGGTAGTGATTTGAAAGTTTCGCTGATTGACAAGAAAGCCAATAGTTCAGTGATGTTGTATGATGATCACATTAGGAAGAAGAAAGTAGAGAAACATGAATATACTGTTCTTGATTATCCTGGTCTTGGGAAGGTTCCACAGGCTACAGAAGGAGAGCAAGTTGCAGCAGGATGGCCGGCTTGGCTTTCTTCGGTTGCTGGTGAAGCTATCAAGGGATGGATACCTCGCAGTGCAAATACTTTTGAGAGGTTACACAAAATTGGCCAAGGAACTTACAGTACTGTTTATAAGGCACGTGATGTGACTCACCAAAAGATTGTTGCTTTGAAAAGAGTACGCTTTGATAACCTTGATCCAGAGAGTGTGAAGTTTATGGCAAGGGAAATCTTTATCCTACGTAGGCTCGACCATCCAAATATAATAAAGTTAGATGGCTTGATAACATCTGAATCATCTCGCAGCTTGTACCTTGTGTTTGAGTATATGGAGCATGATCTCACAGGACTAGCATCACGTCCCGGCGTTAAATTTACAGAACCACAGGTTAAATGCTATGTGAAGCAACTTCTTAGTGGATTAGATCATTGTCATAGTCGTGGTATCCTCCACCGTGACATAAAAGGCTCAAATCTTCTCATTGACAATAATGGCATATTAAAGATTGCAGATTTTGGTTTAGCAAGTTTTTTTGATCCCCATCACAGTGTTCCATTGACCAGCCGTGTAGTGACACTGTGGTATAGACCGCCAGAACTTTTACTTGGGGCATCTAGTTATGGCGTTGCAGTGGATTTGTGGAGTACTGGTTGCATACTGGGAGAACTATATTCTGGCAGGCCCATATTGCCAGGCAAAACAGAGGTTGAGCAATTGCATAGGATTTTTAAGCTTTGTGGCTCACCTTCCGAAGACTATTGGCTTAACTTGCGGCTACCACATTCGACAGCATTCAAGCCTCCACACCATTATAGACGTTGTGTTGCAGAAACATTTAAAGATCATCCATCTTCTTCCCTGAGGCTTATAGAGACCCTACTTTCCCTGGATGCTTCTGATCGAGGAACAGCAGCTACTGCTTTGAAAAGCGAGTTCTTCTCAACGGAACCCCTTGCTTGTGATCCATCAAGTTTACCAAAATATCCTCCCAGCAAAGAGATTGATGCAAAATTGCGTGAAGAAGCAAGCAGAAGGCAAAGAGCAGCTGGAGGAAGGGAGCAGAAAGTTGGTTCGGGAGTTAGACAAGAGCCCTGGATGCATCTTGCATCAGAAGACAATGCTGAGCTACGCTTATCTATGCAGCTTGGACAGCAGCATTCCAATTCAAAGAACAGGAATGAATTGTTCAATCCTCGCGGGAAACCTGTTTCTGGACTTTTAGCTTTTCCACATAAACAATCAGAAGATGGTAAAGCAATAGAAGACAAGCCTTCACACTATTCAGGTCCATTGGTTTATGGTCCTGCCCGAGTAAAGGGTGGGAAGGGTGTTGATGAGCATCCTTCCGTTTCGAACAGAGACAACCTATCAAAACTATCTAGTTTAGTGGCATCTAGGACATTACCATCTGATGATCAAGTAGAAAAACCAGTTCCCTTGCATCCGAAGAAAACATGTGAAGTACGAAAATCTTTGGAGTCAACTAATGGATCAGATTCAAGGAGGAGGCTGGATCAAAGACGGCAGTCTCAGAGAATCGCAGATTTCTGTCAAATAGAAAATAGAAGAGCCCCCAGTAATGAATCAACTCCGGAAGGTCATGGGTCCAGAGGAAACACAAATAAGATCTATCTTTCTGGTCCTATACTTGTTTCATCAAATAATATGGATCAGATACTAAAAGAGCATGATCAAAAGATCCAGAAATATGCAAGACGAGCACGAATTGACAAAGTCAAGAGGTGA	2514	0.4204	MDSDKMICSLVGSYCNMGCISSKSAAVEDSREGLAKKLSSSSKRSSGLNVSRLNSSARDEGLREKAKLDGSDLKVSLIDKKANSSVMLYDDHIRKKKVEKHEYTVLDYPGLGKVPQATEGEQVAAGWPAWLSSVAGEAIKGWIPRSANTFERLHKIGQGTYSTVYKARDVTHQKIVALKRVRFDNLDPESVKFMAREIFILRRLDHPNIIKLDGLITSESSRSLYLVFEYMEHDLTGLASRPGVKFTEPQVKCYVKQLLSGLDHCHSRGILHRDIKGSNLLIDNNGILKIADFGLASFFDPHHSVPLTSRVVTLWYRPPELLLGASSYGVAVDLWSTGCILGELYSGRPILPGKTEVEQLHRIFKLCGSPSEDYWLNLRLPHSTAFKPPHHYRRCVAETFKDHPSSSLRLIETLLSLDASDRGTAATALKSEFFSTEPLACDPSSLPKYPPSKEIDAKLREEASRRQRAAGGREQKVGSGVRQEPWMHLASEDNAELRLSMQLGQQHSNSKNRNELFNPRGKPVSGLLAFPHKQSEDGKAIEDKPSHYSGPLVYGPARVKGGKGVDEHPSVSNRDNLSKLSSLVASRTLPSDDQVEKPVPLHPKKTCEVRKSLESTNGSDSRRRLDQRRQSQRIADFCQIENRRAPSNESTPEGHGSRGNTNKIYLSGPILVSSNNMDQILKEHDQKIQKYARRARIDKVKR	702

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach13g00972	702	MobiDBLite	consensus disorder prediction	597	631	-	-
	Bach13g00972	702	FunFam	probable serine/threonine-protein kinase At1g54610	233	474	-	-
	Bach13g00972	702	ProSitePatterns	Protein kinases ATP-binding region signature.	156	179	IPR017441	GO:0005524
	Bach13g00972	702	MobiDBLite	consensus disorder prediction	39	56	-	-
	Bach13g00972	702	Pfam	Protein kinase domain	150	434	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach13g00972	702	CDD	STKc_CDK9_like	150	434	-	-
	Bach13g00972	702	MobiDBLite	consensus disorder prediction	460	483	-	-
	Bach13g00972	702	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	270	282	IPR008271	GO:0004672\|GO:0006468
	Bach13g00972	702	MobiDBLite	consensus disorder prediction	574	589	-	-
	Bach13g00972	702	MobiDBLite	consensus disorder prediction	37	56	-	-
	Bach13g00972	702	ProSiteProfiles	Protein kinase domain profile.	150	434	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach13g00972	702	FunFam	probable serine/threonine-protein kinase At1g54610	137	232	-	-
	Bach13g00972	702	MobiDBLite	consensus disorder prediction	506	665	-	-
	Bach13g00972	702	Gene3D	Phosphorylase Kinase; domain 1	137	232	-	-
	Bach13g00972	702	Gene3D	Transferase(Phosphotransferase) domain 1	233	473	-	-
	Bach13g00972	702	SMART	serkin_6	150	434	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach13g00972	702	PANTHER	CELL DIVISION PROTEIN KINASE	148	439	-	-
	Bach13g00972	702	SUPERFAMILY	Protein kinase-like (PK-like)	143	440	IPR011009	-
	Bach13g00972	702	MobiDBLite	consensus disorder prediction	632	665	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach13g00972	Bach-Chr13	14746053	14750986	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach13g00972	142	475	Core Cell Cycle Gene Families	AT5G10270	49.714	3.22e-113	349

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_CDK-CRK7-CDK9	Bach13g00972		Pkinase	1.4e-66	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach13g00972	-		-	gmx:100807590	940.258