LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach13g00971	ATGAATATCTTCCCTCCTAGGAAAGCAGATCAAGTTATAGACAAGCATATGAGGCGGCCATTGTGGAATAACTTTTCCACCATTCTCAAGCCCTTGCTGATGTCTCCACCTGCTATATTCTGCCTTCTCATCCTCCTTCAAACTGCTACCAGAATGAGCTCAGTGTTAGCTACTGAATTTGTCTACAATACAAACTTCAACTCCACTAACATCCTCCTCTATGGCAATGCCACTGTTCAGTCCTCTATTCTAACTCTCACCAATGAGAGTTTCTTTTCCATAGGCCGTGTTTTTCACCCTCACAAAGTATCCACCAAAGCAATTAACTCCTCCACCCTTCTCCCCTTTGCAACCTCCTTCATTTTCTCCATTGCTCCAGTTAAACATTATCTCACTGGCCATGGCTTTGCCTTCATATTCTCACCGTCTGGGGGCATAAACGGCACGACCTCAGCTGAATACATTGGCCTTTTAAACCACACCAATGAAGGTAAGCCCTATGATCATCTTTTTGGAGTTGAATTTGATATCAGGAAAAATGTAGAATTCAATGATATAAATGACAACCATGTTGGTATTGACATAAACTCACTCGCTTCCTTGACTGCACATGCTGCGGGGTACTGGAGTGGAAAAGATGATAATGAATTTAAGATTTTGAAGCTAAACAATGGAGAAAATTATCAGGCTTGGATTGAATTTAAGGATTCACAGCTTAATGTTACAATGGCTCGAGCAGGAACAAAAAGGCCTCACAGGCCCTTGATTAGTAAGAATGTTAATCTTTCTGATGTTCTTTTGGATGAAATGTATGTTGGGTTTTGTGCAGCAACAGGGCTATTGTTGGACACTGTTAGAATTATGGCTTGGAGTTTTAGTAATCGGAATCTTTCAATTGGTGATGGCTTGGTCACAAACAATCTGCCTTCATTTGTGCCCAAGAAAGGGTTGTTTTATGGAGCAGGAGCTCTTGTTATAGGGTTCATTGTTGTTTGTGTGATAATCATTGGTTTTTCTTCTGTGGTGTTTGTCGTTTTATGGAAACGGAGAGGTAAGGCTGAGGAAGAAGTTGAAGAGTGGGAATTGGACTACTGGCCACATAGGATTAGTTACCAAGAGATTGAAGCAGCAACAAGAGGGTTCTCTGAAGAGAATGTGATTGGGATTGGAGGGAATGGGAAGGTGTATAAAGGGGTTTTGCAGGGAGCAGAAGTTGCAGTCAAGAGAATCCCTCAGGAAACAGATGAAGGGATGAGAGAGTTTCTGGCAGAGGTTTCAAGCCTAGGAAGAATGACACACAGAAATTTAGTTGGGTTGAGAGGTTGGTGCAAAAAAGAGAAGGGAAACTTGATATTGGTGTATGATTATATGGAGAATGGAAGTTTGGACAAGAGGATTTTTGAGTGTGAAGAAAGAAACTTGCTAAGTTGGGAAGAGAGAATTCAAGTCTTAAAGAATGTAGCTACTGGGATTCTGTATCTGCATGAAGGTTGGGAAGTTAAGGTACTGCATAGAGACATCAAAGCAAGCAATGTGCTACTTGATAAGGATATGAATGCCAGGTTGGGAGACTTTGGATTAGCTCGTATGCATGATCATCAAGGGCAAGTGGCCACCACAACAAAAGTAATAGGCACTGTGGGTTACTTAGCTCCTGAAGTGATTCGAACAGGGAGAATCTCAGATCTATCAGATGTGTTTGGTTTTGGAGTACTGGTTTTAGAAGTGGTTTGCGGCCGAAGACCCATTGAAGAAAACAAGCCGTTGCTAATTGAATGGTTACTGTCCCTAATGGAGATTGGTGAATTGCATTGTGCTCTTGATGGAAGGTTGAAGGACAAAGGCGGATATACCATTCAGGAAGTAGAGAAATTGCTTCGTTTGGGTTTACTGTGTGCAAATTCAGACCCCAGTGTTAGACCCACAATGAGGCAAATCGTTAATATGCTGGAAGGGTTAAGTGAAGGTAATGAATCCAAACAGGACATTTTGGGAATGAGTTTGCCGGAAAAGATAAAATCAGCAGCAATGTGGTCTGAGACTTCTATGACTTCTCCATACAGACATTACCCTACATTACATGAACTTAAGTTGTTCAGTTCTAGTTCTAAAACATCTCAAAGTACCTCGTATGTCATCCCAGATTCGGACAGCTTCCAAGAAGGCAGGTAG	2172	0.4167	MNIFPPRKADQVIDKHMRRPLWNNFSTILKPLLMSPPAIFCLLILLQTATRMSSVLATEFVYNTNFNSTNILLYGNATVQSSILTLTNESFFSIGRVFHPHKVSTKAINSSTLLPFATSFIFSIAPVKHYLTGHGFAFIFSPSGGINGTTSAEYIGLLNHTNEGKPYDHLFGVEFDIRKNVEFNDINDNHVGIDINSLASLTAHAAGYWSGKDDNEFKILKLNNGENYQAWIEFKDSQLNVTMARAGTKRPHRPLISKNVNLSDVLLDEMYVGFCAATGLLLDTVRIMAWSFSNRNLSIGDGLVTNNLPSFVPKKGLFYGAGALVIGFIVVCVIIIGFSSVVFVVLWKRRGKAEEEVEEWELDYWPHRISYQEIEAATRGFSEENVIGIGGNGKVYKGVLQGAEVAVKRIPQETDEGMREFLAEVSSLGRMTHRNLVGLRGWCKKEKGNLILVYDYMENGSLDKRIFECEERNLLSWEERIQVLKNVATGILYLHEGWEVKVLHRDIKASNVLLDKDMNARLGDFGLARMHDHQGQVATTTKVIGTVGYLAPEVIRTGRISDLSDVFGFGVLVLEVVCGRRPIEENKPLLIEWLLSLMEIGELHCALDGRLKDKGGYTIQEVEKLLRLGLLCANSDPSVRPTMRQIVNMLEGLSEGNESKQDILGMSLPEKIKSAAMWSETSMTSPYRHYPTLHELKLFSSSSKTSQSTSYVIPDSDSFQEGR	723

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach13g00971	723	FunFam	L-type lectin-domain containing receptor kinase S.4	56	300	-	-
	Bach13g00971	723	FunFam	Putative L-type lectin-domain containing receptor kinase VII.2	342	456	-	-
	Bach13g00971	723	CDD	lectin_legume_LecRK_Arcelin_ConA	58	293	IPR001220	GO:0030246
	Bach13g00971	723	Gene3D	-	57	303	-	-
	Bach13g00971	723	Gene3D	Phosphorylase Kinase; domain 1	343	456	-	-
	Bach13g00971	723	SUPERFAMILY	Concanavalin A-like lectins/glucanases	58	294	IPR013320	-
	Bach13g00971	723	MobiDBLite	consensus disorder prediction	700	723	-	-
	Bach13g00971	723	FunFam	L-type lectin-domain containing receptor kinase S.4	457	663	-	-
	Bach13g00971	723	Pfam	Legume lectin domain	58	295	IPR001220	GO:0030246
	Bach13g00971	723	Pfam	Protein kinase domain	382	648	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach13g00971	723	ProSiteProfiles	Protein kinase domain profile.	381	653	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach13g00971	723	SMART	serkin_6	381	650	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach13g00971	723	Gene3D	Transferase(Phosphotransferase) domain 1	457	669	-	-
	Bach13g00971	723	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	502	514	IPR008271	GO:0004672\|GO:0006468
	Bach13g00971	723	ProSitePatterns	Protein kinases ATP-binding region signature.	387	408	IPR017441	GO:0005524
	Bach13g00971	723	PANTHER	-	75	654	-	-
	Bach13g00971	723	CDD	STKc_IRAK	387	653	-	-
	Bach13g00971	723	SUPERFAMILY	Protein kinase-like (PK-like)	359	651	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach13g00971	Bach-Chr13	14742236	14744407	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach13g00971	55	599	Receptor kinase-like Gene Family	AT4G04960	57.971	0.0	625

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Bach13g00971		Pkinase	8.7e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach13g00971	-		-	gmx:100804553	963.755