Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00964 GCTATCTTTGGTGCAAAACTACGTTGGTTAAGGAATCATTTGCTTAGGAAAGTTCATTTGGTAGTCAATTAAGTCGTTGGGCTTTCACTTTCTCTATCTGATCAAATTGTGACTCGTCGTTACGCGCGGTAGTTCTTATGTTTGACTCATTTTGAAGCAACCTTTTTGTCTCCTAAGTTATTTTCTGTAATGGGTTTTGGCTTGTTTTCCTGGATTGTGCCGAATCAGCTGGAATTGAGAAGTGAGTGGTTGAATTGGAGTTGGTTCTTTTGAGAAATGGTATGCTTGGGGTTTGATATGGTTGCCAGTGAGAAATTGGAGATTTTTAAGAGGAGGGGACTACGGTTCCTATTCCAGATTGTATTCGGATGCTGGGTTGTTGTAGTGTTTCTTCCTCCAGTGGCAGGTCTAAGACCTTTAAGGGAACGAACTCGGTCGTGGGGCGATGAGTGGCTATATACAAGGAAAGAGGAAAATGAGTTAGGCCCATTTTCACAATGGAACATTACCGGAACTTATAGAGGAACTTGGAAATTTTTGGATTCTGCAAACGGATCTTCCAGGTTTCCAGATATCAGAAAAACTATTGGCAATTCTGTAATTGAATTAGTTAGTACACCAACAAAAATAACTGGTGTGCATTATGTTCAGGGAGTAGTTATATTCCATGATGTATTTGACAGCGAATATAATGTTGGTGGTGCTCAAATCAGATTAGATGGTGTATATATATGGCCTTTTAGACAGCTTCGCATGATAGCCAACAGTGGAAAAGGGGGAGAGTTGAATCTGGAGGATGATTATATTTTATCTAATCCATATCATCTGCTTGGAGTGTTCTCATCCCAGGTATTCCAAGAATCTCCACGAGATAAGATATGGAGGAAGAAACATTCTCCGATGCATGATATGGAGAAACATTGTAATATTGAAATTGCTGCACAGATTTCACGTCTGTCATCATCAAAAAATGATGGAGATCGTGATCGTTTTCATCTAGATGGGTTAATGGAGAGTCCCTCAGTAGATGGTGGAGACTGCTTCTCACCTTTGCTGTTAAATGCAACTTCTGTTAACATTGAGGTCTATTATAATAAAGCAGTGAACTACACCTTGATGGTGACCTTTGTATCTTTCTTGCAAATTCTTCTATTGATTCGGCAAATGGAGCACGGCAACACTCAATCTGGAGCTGCCAAGGTTTCAATATTAATGATTGGTCAGCAGGCTATAATGGATGCTTATCTTTGTCTTTTACATCTGACTGCAGGAATACTAGTTGAATCCTTATTTAATGCTTTTGCAACTGCTGCATTTTTCAAGTTCGTGGTCTTCTCAATATTTGAAATGAGATATCTTCTTGCAATATGGAAGGCAAGTAGGCCTTTGAGTAATGGGGAAGGCTGGGAGACAATGAGGCGTGAGCTTTCAGTTTTATACAGTCGATTCTATGGGATCCTTTTGGGAGGCATTCTGCTCATGTATGAGTTCCATAATTATTTGAAACCTATTCTTCTTTTTGTGTTCTCGTTTTGGATACCTCAGATAATCACCAATGTAGTTCGGGATTCCCGGAAACCATTGCACCCTCATTATATCCTAGGGATAACTGTCACCCGGCTAGCAATCCCTTTATATATTTTTGGTTGCCCTAACAACTTCATGCGCATTGAACCAGACAAGAGCTGGTGTGTTTGTTTAGTTGTATTTATTGGACTTCAAGCTGCAATTCTTCTACTTCAGCATTATCTTGGGTCTCGTTGGTTCATTCCCCATCAGATTCTACCTGAGAAATACAGCTATTATAGGAGGTTTGATCAAGATACTAATCATGCCACAGACTGTGTTATTTGCATGACTGCCATTGATCTTACGCGGCAATCTGGTGATTGCATGGTGACACCTTGTGATCATTTCTTCCACTCCGGTTGCTTGCAAAGATGGATGGATATAAAGATGGAGTGCCCAACTTGCCGGCGCCCGCTGCCACCTTCCTGACGACATTTTCACTGTGTTCATATCAGTAGGATCAACTCAAAGTGCCCTACACAATAATTTTGGTTGGGATAGAATCCATGTTCAGTACCATTGCACCTTCAGAACGAGGCTGATATATATAGTACATAATTTTTCTCATAATTGGACTGTAGCTGATAATCTCAGTATTCCTTTCTGTTAATGTATAAATAATTTTGTACATTAGAAATTAATTACAGTACACATGAAAATCTTCTATCC 2238 0.3972 MVCLGFDMVASEKLEIFKRRGLRFLFQIVFGCWVVVVFLPPVAGLRPLRERTRSWGDEWLYTRKEENELGPFSQWNITGTYRGTWKFLDSANGSSRFPDIRKTIGNSVIELVSTPTKITGVHYVQGVVIFHDVFDSEYNVGGAQIRLDGVYIWPFRQLRMIANSGKGGELNLEDDYILSNPYHLLGVFSSQVFQESPRDKIWRKKHSPMHDMEKHCNIEIAAQISRLSSSKNDGDRDRFHLDGLMESPSVDGGDCFSPLLLNATSVNIEVYYNKAVNYTLMVTFVSFLQILLLIRQMEHGNTQSGAAKVSILMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPLSNGEGWETMRRELSVLYSRFYGILLGGILLMYEFHNYLKPILLFVFSFWIPQIITNVVRDSRKPLHPHYILGITVTRLAIPLYIFGCPNNFMRIEPDKSWCVCLVVFIGLQAAILLLQHYLGSRWFIPHQILPEKYSYYRRFDQDTNHATDCVICMTAIDLTRQSGDCMVTPCDHFFHSGCLQRWMDIKMECPTCRRPLPPS 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00964 573 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 509 573 IPR013083 -
Bach13g00964 573 Pfam Ring finger domain 522 567 IPR001841 -
Bach13g00964 573 CDD RING-H2_TUL1-like 517 572 - -
Bach13g00964 573 PANTHER RING ZINC FINGER PROTEIN 134 572 - -
Bach13g00964 573 ProSiteProfiles Zinc finger RING-type profile. 523 567 IPR001841 -
Bach13g00964 573 FunFam E3 ubiquitin-protein ligase, putative 509 573 - -
Bach13g00964 573 SMART ringv_2 522 567 IPR011016 GO:0008270
Bach13g00964 573 SMART ring_2 523 566 IPR001841 -
Bach13g00964 573 SUPERFAMILY RING/U-box 505 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00964 Bach-Chr13 14702229 14708837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00964 514 573 C3H Transcription Factor Family AT1G53010 31.148 3.48e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00964 K23788 - qsu:112035018 1022.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g00964 13 14702229 14708837 Bach13g00964 13 14702229 14708837 ECH