Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00961 AGAGTAGTGAAGAGGGAGGCTTCAGGGGATTATGATGAGGAAAATGAGTACGTGGAGGAGGGTAAAAAGAAAATTTGCGTTGGTGGGTCTGAGAAAGAACCGTCCGGCCGCGGCAGCAGCGGAAGTAGCATGCAGTGTTGTCAAGCGGAAAGGCGTACGGCGGATCTTATTGATGCGGAGCAGTATCATAGGACCTCACAAGGTGTGTGAATATCATGCTAAGGCTCAGGTAGTGCTGGTGGGTGGCATGCGCCAACGGTTTTGTCAGCAATGTAGCAGATTCCAAGAGTTAGCTGAATTCGATGACACGAAAAGAAGTTGCCGCAGGCGTTTGGCTGGACATAACGAACGGCGAAGAAAGAATTCGGAATCTCGAGCAGAAGGCTCAACACGGAAAGGGACAGGTTCTCAGTTGAAGGACATTGCTTGTGGACAGGTTGGTGACACGGGGAGAATCAAGATAACCATTCAAGAAAATGCCACTTTCAAACATTTCCATATAAGATAATTGCTTGCTTTGAAAGTATGCTCTCTCTCTTCTGTCATCCTGGGGATGTATTATTACCTATTGCTATGTCAATTTTGTGTTGATAAATGAATTTATATCCAAGACTACTGTAAGAAACAAGGCAAAATTCATTTCCTGGTGCTTCAGTTGCCAGTGTAGCAGTTAAATAAAAATTATGTAACTTTCATCATTTATTCTTTAA 710 0.438 MMRKMSTWRRVKRKFALVGLRKNRPAAAAAEVACSVVKRKGVRRILLMRSSIIGPHKVCEYHAKAQVVLVGGMRQRFCQQCSRFQELAEFDDTKRSCRRRLAGHNERRRKNSESRAEGSTRKGTGSQLKDIACGQVGDTGRIKITIQENATFKHFHIR 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00961 158 Pfam SBP domain 56 110 IPR004333 GO:0003677
Bach13g00961 158 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 56 115 IPR044817 GO:0003677
Bach13g00961 158 MobiDBLite consensus disorder prediction 101 126 - -
Bach13g00961 158 Gene3D - 31 98 IPR036893 GO:0003677|GO:0005634
Bach13g00961 158 ProSiteProfiles Zinc finger SBP-type profile. 27 111 IPR004333 GO:0003677
Bach13g00961 158 SUPERFAMILY SBT domain 55 114 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00961 Bach-Chr13 14690866 14692301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00961 56 158 SBP-box Gene Family AT3G15270 56.190 2.39e-29 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bach13g00961 SBP 5.9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00961 - - jre:108986645 175.637