Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00958 ATGAGCAGTGTCTGTGCTGAGCAGCATAAGTTTCATCCTTTTCACCATCTCCAGAAGAAATCAATGATCAGGGACATTGACATCCCACCCAGGAAGCTCCTCACTAGGCATGCCAATGCCGGTGCTACCCATGAAGGTGCTGCTGCTGACTCACCACGGTTCTCCTCAGCTGAGGAGACCCTCTTACAGAAATTCCTTCCCTACAACAACCTTTTGGAGTCTGATGATGGATCTGACCCCTATTCTTCTGATCACTTCCGCATGTATGAATTCAAGGTCCGTCGATGCACCCGTAGCCGGAGTCATGACTGGACAGATTGCCCATTTGCTCACCCAGGTGAGAAAGCTCGCCGTCGTGACCCCAGACGGTATCACTACTCGGGTACCGTTTGCCCAGAGTATCGCCGTGGTGGATGCAGCCGCGGGGATAGCTGCGACTTTGCTCATGGGGTGTTTGAGTGCTGGCTTCATCCATCTAGGTACCGAACTGAAGCTTGCAAGGATGGCAAGAATTGCAAGCGAAAGGTATGCTTTTTCGCTCACACTCCTCGGCAACTCAGGATTTTGCCTGTGAATTCCTATAATTCTTCAGCTGACATTTCATGCAAGAATAGCAAATTCTTGAACAACAACTGCTGCTTGTTTTGCCATTGCTCCTCTACTTCCTCTCCAACTTCTACTCTGTTGGGCATGTCTCATTTCTCTCCGCCACTATCACCGTCATCGTCCTCCGTCTCGCCACCTCTTTCACCGGTCAAACAACTCCGGGCTGCAAATGGGTTCTCGCCTATTTCTCGATATAGTGATAGATTTGGGGGATCTGAGGCATCAAGTGGGCTGAATCATGGGGTGGTTAGCTACAAAGACGTGCTCCCCGAGTTGATGACCTCCTTGGAGGGTCTGAATTTTTCTGAAGCTTCACCTGTTTCTGCTTCTGCTCATAAGCCATCAAATCTGCCTTGGCTTGATGTTTCTTTTAACTTTGAAGATCAGCAGCAGCAGCAGTTCATTCTTTCACCAACCACTTCTTTCAATTGTGAAGATCAGCATCAATTTATTCTTTCACCATCCACTCAGACCCTAACTGCTTCTGGGTCTGCAAACTTTTCCGATGGGAACTATTCCAGCAACAAAATCTTCAGCAATGAGAGCAAGCTTGTCACTGATAACGGGTCATGCCCAGCCCCAGATCTCGGGTGGGTCAATGAGCTGCTCATGTAG 1221 0.4898 MSSVCAEQHKFHPFHHLQKKSMIRDIDIPPRKLLTRHANAGATHEGAAADSPRFSSAEETLLQKFLPYNNLLESDDGSDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRYHYSGTVCPEYRRGGCSRGDSCDFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHTPRQLRILPVNSYNSSADISCKNSKFLNNNCCLFCHCSSTSSPTSTLLGMSHFSPPLSPSSSSVSPPLSPVKQLRAANGFSPISRYSDRFGGSEASSGLNHGVVSYKDVLPELMTSLEGLNFSEASPVSASAHKPSNLPWLDVSFNFEDQQQQQFILSPTTSFNCEDQHQFILSPSTQTLTASGSANFSDGNYSSNKIFSNESKLVTDNGSCPAPDLGWVNELLM 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00958 406 Pfam CCCH-type zinc finger 130 150 IPR041367 -
Bach13g00958 406 FunFam Zinc finger CCCH domain-containing protein 66 83 151 - -
Bach13g00958 406 Gene3D - 125 189 - -
Bach13g00958 406 SMART c3hfinal6 160 183 IPR000571 GO:0046872
Bach13g00958 406 SMART c3hfinal6 125 151 IPR000571 GO:0046872
Bach13g00958 406 PANTHER UNKEMPT FAMILY MEMBER 38 405 IPR045234 -
Bach13g00958 406 SUPERFAMILY CCCH zinc finger 124 154 IPR036855 GO:0046872
Bach13g00958 406 ProSiteProfiles Zinc finger C3H1-type profile. 126 152 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00958 Bach-Chr13 14669087 14670307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00958 81 187 C2H2 Transcription Factor Family AT5G07500 69.159 4.42e-52 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach13g00958 zf-CCCH 1.1e-05 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00958 K23047 - qsa:O6P43_028831 520.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g00958 13 14669087 14670307 Bach13g00958 13 14669087 14670307 ECH