Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00956 GTTCACTATAGAGGCGTTCGAAAAAGGCCATGGGGCCGCTACGCCGCCGAAATCCGAGATCCCGGCAAGAAGAGTCGGGTTTGGTTGGGGACCTTCGACACGGCGGAGGAGGCTGCCAGAGCCTACGACGCTGCCGCCACGCAATTCCGTGGCCCCAAGGCGAAGACCAATTTCCCTTTGCCCGACGGGAGCCCTCAAAACGGGAATCAGAGTCCCAGCGAGAGTAGCACCGTCGAGTCTACCAGCCGTGATGTGCCGGTGCGTGAAGTCGCTCGCCGATGTGATGTTGGTTATGTCGTGGATCGATTCCCATTTCTCCCCTTGCAGCCACAGCACATGGCGTACGGTGGTGGTCCCGCCGGCACTGTCGTCGAGAGCCTCGTAGCTCCCGTGCGACCCGTTTTCTTCATTGACCCAGCTACTAGTAGGGCAGAGTTTGTGGGTCAGCCTTATCCTGTCCGATTCGAACCGTCGCCGCTCCGGCGTAATGTCGGTTTTGGGAGTGGGGCTCAGACTCAGAGTGACTCAGATTCATCTTCCGTCGTTGATTGCCAGCCTAAAAAAGCTATTAATCTTGATCTTAATCTGGCTCCTCCTGTGGACGTCTAAATGGCGTACGGTGGTGGTCCCGCCGGCACTGTCGTCGAGAGCCTCGTAGCTCCCGTGCGACCCGTTTTCTTCATTGACCCAGCTACTAGTAGGGCAGAGTTTGTGGGTCAGCCTTATCCTGTCCGATTCGAACCGTCGCCGCTCCGGCGTAATGTCGGTTTTGGGAGTGGGGCTCAGACTCAGAGTGACTCAGATTCATCTTCCGTCGTTGATTGCCAGCCTAAAAAAGCTATTAATCTTGATCTTAATCTGGCTCCTCCTGTGGACGTCTAAATTTTTCACCAATTTTCCGTGTTAACATTCCACAACCCGCGAATTTTTCTTTTTTTTCTTTTTGATCTTCTGTTATTTTGAGGAAGAGAAGAAGTTTTTATCTTTGATGTAAATCAGTTAGATTTCATTAACAATATAAACGGAAAAGAAGTCCCAGATTTTCTAGATTGGGTTTTAACTTGTGTAACCTCGAATCTATCTGTCTAATTGATGTTATCTACCTTCAAA 1110 0.5108 MAVKERLSVKKANHATTNAKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDAAATQFRGPKAKTNFPLPDGSPQNGNQSPSESSTVESTSRDVPVREVARRCDVGYVVDRFPFLPLQPQHMAYGGGPAGTVVESLVAPVRPVFFIDPATSRAEFVGQPYPVRFEPSPLRRNVGFGSGAQTQSDSDSSSVVDCQPKKAINLDLNLAPPVDV 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00956 223 Pfam AP2 domain 23 72 IPR001471 GO:0003700|GO:0006355
Bach13g00956 223 PRINTS Ethylene responsive element binding protein signature 46 62 IPR001471 GO:0003700|GO:0006355
Bach13g00956 223 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Bach13g00956 223 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 15 204 - -
Bach13g00956 223 Gene3D AP2/ERF domain 22 81 IPR036955 GO:0003700|GO:0006355
Bach13g00956 223 MobiDBLite consensus disorder prediction 81 104 - -
Bach13g00956 223 MobiDBLite consensus disorder prediction 185 204 - -
Bach13g00956 223 MobiDBLite consensus disorder prediction 1 21 - -
Bach13g00956 223 FunFam Ethylene-responsive transcription factor 2 22 81 - -
Bach13g00956 223 SUPERFAMILY DNA-binding domain 23 81 IPR016177 GO:0003677
Bach13g00956 223 CDD AP2 23 80 IPR001471 GO:0003700|GO:0006355
Bach13g00956 223 ProSiteProfiles AP2/ERF domain profile. 23 80 IPR001471 GO:0003700|GO:0006355
Bach13g00956 223 SMART rav1_2 23 86 IPR001471 GO:0003700|GO:0006355
Bach13g00956 223 MobiDBLite consensus disorder prediction 73 107 - -
Bach13g00956 223 MobiDBLite consensus disorder prediction 186 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00956 Bach-Chr13 14650460 14651359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00956 11 221 AP2-EREBP Transcription Factor Family AT5G44210 47.196 9.29e-51 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach13g00956 AP2 1.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00956 K09286 - qsa:O6P43_000758 265.388