Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00952 GCTCTCTCTGTCCTTCTTCTTCTTCTTCATTAGTTTCATGAATTCTCGGTGCAGCAACTGCTCTTATTCGGCCTGACCGGTTCAGTTGCAGAGTAAAACATGGCTTCTCTATTCAAGGATCCTACGAAGCTTTCGGCATATCGAGATAGAAGATTTCCTGGATCACAAGAGGAATTTGAACAAGCACTTCAGGCATCAACAACAGCTTATGTTGGAAATATGTCCTTCTACACTACAGAAGAACAAGTCTATGAACTTTTCTCCCGAGCTGGAGAAATAAAGAAAATCATTATGGGCTTGGATAAGAACTCAAAAACACCTTGCGGATTTTGCTTTGTTTTATATTACTCTCGTGAAGATACAGAGGATGCTGTCAAATGTATAAGTGGGACAATACTTGATGATCGTCCTATTCGTGTTGATTTTGACTGGGGATTCGAGGAAGGTCGACAATGGGGCCGTGGTCGTAGTGGTGGGCAGGTGCGTGATGAATATCGAACAGATTATGATCCTGGTAGAGGTGGTTATGGGAAGTTAGTTCAGAAAGAGTTGGAAGAACAAAGGCAGCTTGTAGATTATGGTGCTGGTTCTTTGGGCTCCTTCCCACCGGTTATGCCACCTTCCTATGGTAGACATGGCGGAGGCTATGGTCATGGTGGTTCTCGTCGGCATGGTAGAGATTACTATCGAAAGAGACAAAGAGATGACGACCGCCATACACACGAGCCCTCTAAAAGAACGTCAGATCATGAATCTCGGAGGAACTCTGATCCTGACTCTAGACCAGAGAAGAATCCACGATTTCGTGAGAGTGGTAATTCGGATGATGACGAGGATGAGGATCGAAAAGGGCGGTCTTAG 861 0.4483 MASLFKDPTKLSAYRDRRFPGSQEEFEQALQASTTAYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKCISGTILDDRPIRVDFDWGFEEGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEEQRQLVDYGAGSLGSFPPVMPPSYGRHGGGYGHGGSRRHGRDYYRKRQRDDDRHTHEPSKRTSDHESRRNSDPDSRPEKNPRFRESGNSDDDEDEDRKGRS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00952 253 MobiDBLite consensus disorder prediction 124 138 - -
Bach13g00952 253 MobiDBLite consensus disorder prediction 196 253 - -
Bach13g00952 253 Gene3D - 6 150 IPR012677 -
Bach13g00952 253 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 37 106 IPR000504 GO:0003723
Bach13g00952 253 PANTHER 20 KD NUCLEAR CAP BINDING PROTEIN 2 155 IPR027157 GO:0000339|GO:0005846|GO:0045292
Bach13g00952 253 SUPERFAMILY RNA-binding domain, RBD 22 144 IPR035979 GO:0003676
Bach13g00952 253 MobiDBLite consensus disorder prediction 162 253 - -
Bach13g00952 253 FunFam Nuclear cap-binding protein subunit 2 4 150 - -
Bach13g00952 253 SMART rrm1_1 35 108 IPR000504 GO:0003723
Bach13g00952 253 CDD RRM_NCBP2 37 113 IPR034148 -
Bach13g00952 253 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 34 112 IPR000504 GO:0003723
Bach13g00952 253 MobiDBLite consensus disorder prediction 120 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00952 Bach-Chr13 14636991 14639933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00952 31 122 Eukaryotic Initiation Factors Gene Family AT1G49760 27.174 8.28e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00952 K12883 - zju:107411315 409.838