Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00949 ATGCTCGCGGTGTCACATCTGAGGAGCACCAGAGATGAAAACCAAGGAGAGATGGAGAGATTCTCGATGGGTGCTGATGAGTTCGGAGACCTTTCCGATGGGAGTTTACTGGAAAGCATCAATTTTGACGATCTCTTCGTGGATATCAACGATGGAGATGTCTTGCCCGATTTGGAGATGGACTCGGAGATTTTCGCAGAGTTCTCCCTTAGCGCCGGGGAGGAATCGGATTTGACCTCATCAGTTTCAGCAGATAATAAAGCTCGTGAGACTGTGTCTACGAAGAAAGAAGATGAAGATAAAGCTTCTACGGGTTCGGGTTCTGATATTTCCGGAGAGGAGATATTGAGCAAAAAAGAAGAATCTGTGACGGTTAATCCATCTCCAAAGGAAGCTGACAAGGGAAGAAAATCATCATCGTCTGCTCAATCTAAGAATTCACAAGGGAAGAGAAAAGTTAAGGTTGATTGGACCCCGGAATTGCACAGGCGATTTGTGCAAGCAGTTGAACAACTAGGAGCGGATAAGGCAGTCCCTTCAAGGATTTTGGAGATTATGGGAATTGACTGTCTCACTCGCCATAATATCGCCAGCCACCTTCAAAAATATCGATCGCATAGGAAACATTTACTAGCTCGTGAAGCAGAAGCAGCAAGGAGCAAGAGAAGGCAAATGTATGGAGTGGCAGGTGCAGGCGGAGGAGGAGGAAAGAGAGAAGTTAGCCCTTGGCCAGCACCCACCATGGGTTTCCCACCTCCCATGAATCCAATGCACCATTTTAGACCCTTACATGTATGGGGGCATCCCACCGTGGACCAGTCATTTATGCACATGTGGGCAAAACACCTACCACCACATTCCCAGTCACCACCGCCGCCAGCGTGGGCACCACCTCCACTAGACCCTTCATACTGGCACCAAAGGGTTCCTAACGCGCTAACCCCATCTGGAGCACTGTGTTTTCCACAACCTCTGACTACAACGTACATATTTTGGTTCACTCCCCGTAGAGCATATATTTATATTGCTATTTTCATGCAGAGATTTGCCACCTCTCCTCCTGTCCCGGGCATCCCACCCCATGCCATGTACAAAGTAGATCCCGACATTGCCGTGCCGACCGGGCAACCAGGCCCACGGCCTCTCTGCGACCTCCACCCTTCAAATGAGAGCATAGATGCAGCTATTGGAGATGTTTTATCAAAACCATGGCTGCCATTGCCACTTGGTCTTAAAGCTCCAGCTCTTGATAGTGTGATGGGTGAATTACAGCGACAAGGAATTCCCAAAATTCCACCCTCCTCCTGTGCATGA 1314 0.4886 MLAVSHLRSTRDENQGEMERFSMGADEFGDLSDGSLLESINFDDLFVDINDGDVLPDLEMDSEIFAEFSLSAGEESDLTSSVSADNKARETVSTKKEDEDKASTGSGSDISGEEILSKKEESVTVNPSPKEADKGRKSSSSAQSKNSQGKRKVKVDWTPELHRRFVQAVEQLGADKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAARSKRRQMYGVAGAGGGGGKREVSPWPAPTMGFPPPMNPMHHFRPLHVWGHPTVDQSFMHMWAKHLPPHSQSPPPPAWAPPPLDPSYWHQRVPNALTPSGALCFPQPLTTTYIFWFTPRRAYIYIAIFMQRFATSPPVPGIPPHAMYKVDPDIAVPTGQPGPRPLCDLHPSNESIDAAIGDVLSKPWLPLPLGLKAPALDSVMGELQRQGIPKIPPSSCA 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00949 437 NCBIfam myb-like DNA-binding domain, SHAQKYF class 152 206 IPR006447 GO:0003677
Bach13g00949 437 Gene3D - 149 210 - -
Bach13g00949 437 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 436 IPR044825 GO:0003700|GO:0045893
Bach13g00949 437 MobiDBLite consensus disorder prediction 89 104 - -
Bach13g00949 437 MobiDBLite consensus disorder prediction 75 154 - -
Bach13g00949 437 Pfam Myb-like DNA-binding domain 155 204 IPR001005 -
Bach13g00949 437 SUPERFAMILY Homeodomain-like 150 209 IPR009057 -
Bach13g00949 437 MobiDBLite consensus disorder prediction 113 138 - -
Bach13g00949 437 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 149 208 IPR017930 -
Bach13g00949 437 FunFam Two-component response regulator 148 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00949 Bach-Chr13 14612242 14614922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00949 29 308 G2-like Transcription Factor Family AT5G44190 45.333 4.57e-61 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bach13g00949 Myb_DNA-binding 9.7e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00949 - - cave:132183136 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g00949 13 14612242 14614922 Bach13g00949 13 14612242 14614922 ECH