Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00922 ATGACCATGCGTAGCCTCCTTCAATATTATCAAAGGACTGAGAATTCTTGGAGATCGTCCCACCAAAGTGACTTGAACAGCAAGATCTTGCTCATAGCTATCATTTCTTTATCATTTGTCTTGGTTCTTGTCTTTGCTCTTCATCTCTATGCTCGATGCGTTCTAAGGCGCCAAGCTCGTCGCCGCGCTGCCCTTCGCCAGTTCGGCCTCACGGTGGCTCATGCTCGTGCCCACTACACAGAGCCACCCAACACAGGGCTCGAACCAACCCTCATAGATGCTCTCCCCGTATTCCTCTTCAAACGCAAGGAACGAACTCAACAGAAGGGCCATGATTCTTCGGTGGTGGAGTGTGCTGTCTGTTTGAGTGCTTTGGAAGATGAAGAATTGGTGAGGTTGCTCCCAAATTGTAACCACAGTTTCCATGTGGAATGCATTGACACATGGTTGGCTTCACATTCTACCTGTCCCGTTTGTCGAACCAAGGCTGAGCCACGGCTCGAACCACACCCTCGCGAGCCTCCTGCTGCTCCAGCTCTTGCTCATGTTGATGCACCAATGGCTCCACCATTGGAACAACAACAACAACAACCGCCACAGATGGAGGGTACATCAGATGGTGGGTCACCAAAAATCAACGGTTCTAATTCACGCTTGAGCTCATTCAGAAGGATTCTTAGTAGGGAAAGATCGTCAAGAAGAATCCAACCTTCTACCCAAGATGATCATAATACTATTCAAGATTTGGAGAGACAGTGA 759 0.4875 MTMRSLLQYYQRTENSWRSSHQSDLNSKILLIAIISLSFVLVLVFALHLYARCVLRRQARRRAALRQFGLTVAHARAHYTEPPNTGLEPTLIDALPVFLFKRKERTQQKGHDSSVVECAVCLSALEDEELVRLLPNCNHSFHVECIDTWLASHSTCPVCRTKAEPRLEPHPREPPAAPALAHVDAPMAPPLEQQQQQPPQMEGTSDGGSPKINGSNSRLSSFRRILSRERSSRRIQPSTQDDHNTIQDLERQ 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00922 252 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 166 IPR013083 -
Bach13g00922 252 SUPERFAMILY RING/U-box 117 167 - -
Bach13g00922 252 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 18 170 - -
Bach13g00922 252 SMART ring_2 118 159 IPR001841 -
Bach13g00922 252 MobiDBLite consensus disorder prediction 191 252 - -
Bach13g00922 252 CDD RING-H2_EL5-like 117 160 - -
Bach13g00922 252 Pfam Ring finger domain 117 160 IPR001841 -
Bach13g00922 252 MobiDBLite consensus disorder prediction 223 237 - -
Bach13g00922 252 FunFam E3 ubiquitin-protein ligase ATL6 75 166 - -
Bach13g00922 252 ProSiteProfiles Zinc finger RING-type profile. 118 160 IPR001841 -
Bach13g00922 252 MobiDBLite consensus disorder prediction 191 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00922 Bach-Chr13 14442092 14442850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00922 17 252 C3H Transcription Factor Family AT2G42360 47.083 4.34e-56 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00922 K19038 - jre:108993654 191.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g00922 13 14442092 14442850 Bach13g00922 13 14442092 14442850 ECH