Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00899 ATGGCCTCCATGCCCTTGGGGCCGCAGCACCATCAACCACCGCCAGTAGCCGCTCCACCAACACAACCTCCGTTGCAGCCCGCAGTGGAAAGTGAACCGCAGAGAGTAGTTAGTGGTCGAGGTTCTGATATGGAAACCGATAAGCAGGACATGTCAGCTACCGTAATCGAGGGGAATGACACAGTCACTGGCCACATAATTTCCACCACCATTGGAGGCAAAAATGGTGAACCTAAACGGACCATCAGTTACATGGCTGAACGTGTTGTTGGCACTGGATCATTTGGAATTGTTTTCCAGGCAAAGTGCTTAGAGACTGGGGATGCTGTGGCTATAAAGAAGGTCTTGCAAGACAGGCGGTACAAAAATCGTGAGCTACAGTTGATGCGCCTGATGGATCACCCAAATGTGGTTTCCTTGAAGCACTGTTTCTTTTCTACAACTAGTAGAGATGAACTTTTCCTGAACTTGGTAATGGAGTATGTCCCTGAGACAATGTACCGAGTTCTAAAACATTACAGTAGTATGAACCAGAGGGTGCCCCTCATCTATGTAAAACTTTATACATATCAAATCTTTAGGGGACTAGCATATATCCACACTGTACCTGGAGTTTGCCATAGGGACGTGAAGCCTCAAAATCTTTTGGTTGATCCGCTCACGCACCAAGTTAAGCTTTGTGACTTTGGGAGCGCAAAAGTTCTCGTCAAGGGTGAAGCAAATATATCTTACATATGTTCACGTTACTATCGAGCTCCAGAACTAATATTTGGTGCAACCGAATACACAACTTCTATTGATATCTGGTCAGCTGGTTGTGTCCTTGCTGAGCTTCTTATAGGCCAGCCGTTGTTTCCTGGAGAAAACCAAGTGGACCAACTTGTGGAAATTATTAAGGTTCTTGGAACACCAACTCGAGAAGAAATTCGTTGCATGAATCCTAATTATACAGATTTTAGATTCCCTCAGATTAAAGCTCATCCTTGGCACAAGGTTTTCCACAAGCGAATGCCTCCTGAAGCAATTGACCTCGCATCACGGCTTCTTCAATATTCACCAAGTCTGCGCTGCACTGCGTTGGAAGCATGTGCACATCCTTTCTTTGATGAGCTTCGTGAGCCTAATGCCCGACTGCCCAATGGCCGTCCACTGCCTCCTCTTTTTAACTTCAAACAGGAATTATCTGGTGCATCGCCTGAATTGATCAATAGGCTCATCCCAGAGCATGTTAGGCGGCAGACTGGTCTCAGCTACCCTCATCCGGCAGGTTAG 1272 0.4638 MASMPLGPQHHQPPPVAAPPTQPPLQPAVESEPQRVVSGRGSDMETDKQDMSATVIEGNDTVTGHIISTTIGGKNGEPKRTISYMAERVVGTGSFGIVFQAKCLETGDAVAIKKVLQDRRYKNRELQLMRLMDHPNVVSLKHCFFSTTSRDELFLNLVMEYVPETMYRVLKHYSSMNQRVPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLIGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELINRLIPEHVRRQTGLSYPHPAG 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00899 423 ProSitePatterns Protein kinases ATP-binding region signature. 90 114 IPR017441 GO:0005524
Bach13g00899 423 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 48 413 - -
Bach13g00899 423 MobiDBLite consensus disorder prediction 8 27 - -
Bach13g00899 423 Pfam Protein kinase domain 84 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00899 423 Gene3D Transferase(Phosphotransferase) domain 1 164 411 - -
Bach13g00899 423 MobiDBLite consensus disorder prediction 1 49 - -
Bach13g00899 423 FunFam Glycogen synthase kinase-3 beta 68 163 - -
Bach13g00899 423 SUPERFAMILY Protein kinase-like (PK-like) 83 394 IPR011009 -
Bach13g00899 423 ProSiteProfiles Protein kinase domain profile. 84 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00899 423 FunFam Shaggy-related protein kinase kappa 164 411 - -
Bach13g00899 423 CDD STKc_GSK3 79 371 IPR039192 -
Bach13g00899 423 Gene3D Phosphorylase Kinase; domain 1 69 163 - -
Bach13g00899 423 SMART serkin_6 84 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00899 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00899 Bach-Chr13 14228283 14233829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00899 88 406 MAP Kinase Gene Family AT3G59790 35.329 7.43e-57 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Bach13g00899 Pkinase 2.2e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00899 K14502 - qsu:111995841 770.77